RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 TFP02787 698 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAF1P04049 648 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 OSMP13725 252 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 APEHP13798 732 aaKnown RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 ANXA8P13928 327 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 CBR1P16152 277 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARR3P36575 388 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF133P52736 654 aaPredicted RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 PRSS12P56730 875 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 PSG4Q00888 419 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZIK1Q3SY52 487 aaPredicted RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 PLBD1Q6P4A8 553 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 SPATC1Q76KD6 591 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 HIPK1Q86Z02 1210 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 GLB1L2Q8IW92 636 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF511Q8NB15 262 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 SMAP2Q8WU79 429 aaPredicted RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 DUS3LQ96G46 650 aaKnown RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 GRIP2Q9C0E4 1043 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR51V1Q9H2C8 321 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 S100A14Q9HCY8 104 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 CA10Q9NS85 328 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 TVP23BQ9NYZ1 205 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEFF2Q9UIK5 374 aaPredicted RBP6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 B9D1Q9UPM9 204 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 CHD3Q12873 2000 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 C5orf49A4QMS7 147 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 LY6HO94772 140 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 ATE1O95260 518 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 DBHP09172 617 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 GAAP10253 952 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 ZNF3P17036 446 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 HOXB6P17509 224 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 CD53P19397 219 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 HTR5AP47898 357 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 ART1P52961 327 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 HGFACQ04756 655 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 RCN1Q15293 331 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 MSMPQ1L6U9 139 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 ALKBH6Q3KRA9 238 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 KLHL12Q53G59 568 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 ZNF101Q8IZC7 436 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 CBR4Q8N4T8 237 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 TTTY10Q9BZA0 68 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 WNT5BQ9H1J7 359 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 WDR76Q9H967 626 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 HINT3Q9NQE9 182 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 MRPL22Q9NWU5 206 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 PLEK2Q9NYT0 353 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 LHFPL6Q9Y693 200 aa6.27□□□□□ -1.41
DEPDC1B-201ENST00000265036 LOC100509620A0A075B734 347 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SERPINA5P05154 406 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SPI1P17947 270 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 NPR2P20594 1047 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 DNASE1P24855 282 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CRABP1P29762 137 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 FABP6P51161 128 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CRISP1P54107 249 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 RPS7P62081 194 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 ADAM8P78325 824 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 GLO1Q04760 184 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 COX10Q12887 443 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 PTGES3Q15185 160 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 FAM27BQ5VT28 67 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 KDM4DQ6B0I6 523 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 ZFP1Q6P2D0 407 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 TMEM53Q6P2H8 277 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 DNM1P34Q6PK57 102 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CD300LDQ6UXZ3 194 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CFAP77Q6ZQR2 320 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 RFPL4BQ6ZWI9 263 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 DEPDC4Q8N2C3 294 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 ZCCHC24Q8N2G6 241 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 PQLC1Q8N2U9 271 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 MUC15Q8N387 334 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SLC26A10Q8NG04 563 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 OR10H5Q8NGA6 315 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 FNDC8Q8TC99 324 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 ZMYND19Q96E35 227 aaPredicted RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 PLEKHA8Q96JA3 519 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SYT3Q9BQG1 590 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 OR2H1Q9GZK4 316 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 KCNN2Q9H2S1 579 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CMC2Q9NRP2 79 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 CRNNQ9UBG3 495 aaPredicted RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 COMMD3-BMI1R4GMX3 469 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 ABCA1O95477 2261 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 IQCMA0A1B0GVH7 501 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SURF4O15260 269 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SGCEO43556 437 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 IFNGP01579 166 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 MRPL3P09001 348 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 SPARCP09486 303 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 DANCRP0C864 163 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 STOMP27105 288 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 THBS4P35443 961 aa6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 NAA10P41227 235 aaPredicted RBP6.26□□□□□ -1.41
DEPDC1B-201ENST00000265036 PPP2R2BQ00005 443 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms