RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ICA1LQ8NDH6 482 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 HPS1Q92902 700 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 GPX7Q96SL4 187 aaPredicted RBP13.75□□□□□ -0.21
USE1-201ENST00000263897 SOX7Q9BT81 388 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 WACQ9BTA9 647 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 CHODLQ9H9P2 273 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 POLE4Q9NR33 117 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 V9GYQ6 96 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 UNC119BA6NIH7 251 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 ARPC2O15144 300 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 GADD45GO95257 159 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 FAM157CP0CG43 387 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 ACHEP22303 614 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 SDHAP31040 664 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 TMEM33P57088 247 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 TRIP10Q15642 601 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 ZNF718Q3SXZ3 478 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 SPATS1Q496A3 300 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 ZNF774Q6NX45 483 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 TMEM154Q6P9G4 183 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 UGT2A3Q6UWM9 527 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 C16orf89Q6UX73 402 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 UNQ6126/PRO20091Q6UXV3 157 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 THSD4Q6ZMP0 1018 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 DPY19L2P2Q6ZN68 376 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 C1orf174Q8IYL3 243 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 DEFB107AQ8IZN7 70 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 SNX33Q8WV41 574 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 MARS2Q96GW9 593 aaKnown RBP13.74□□□□□ -0.21
USE1-201ENST00000263897 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
USE1-201ENST00000263897 NSMCE2Q96MF7 247 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 GPA33Q99795 319 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 EMC7Q9NPA0 242 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 KRCC1Q9NPI7 259 aaPredicted RBP13.74□□□□□ -0.21
USE1-201ENST00000263897 NDE1Q9NXR1 346 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 NKIRAS2Q9NYR9 191 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 LPAR3Q9UBY5 353 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 IL20RAQ9UHF4 553 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 KCNS2Q9ULS6 477 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 IER3IP1Q9Y5U9 82 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 MXRA5Q9NR99 2828 aa13.74□□□□□ -0.21
USE1-201ENST00000263897 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
USE1-201ENST00000263897 TEX13CA0A0J9YWL9 993 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 ICMTO60725 284 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 NCR1O76036 304 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 CTLA4P16410 223 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 IGFBP5P24593 272 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 GCH1P30793 250 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 IL2RGP31785 369 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 MAGEB1P43366 347 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 MNAT1P51948 309 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 KRR1Q13601 381 aaKnown RBP13.73□□□□□ -0.21
USE1-201ENST00000263897 PCGF3Q3KNV8 242 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 ZER1Q7Z7L7 766 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 RASD2Q96D21 266 aa13.73□□□□□ -0.21
USE1-201ENST00000263897 VSX1Q9NZR4 365 aaPredicted RBP13.73□□□□□ -0.21
USE1-201ENST00000263897 SOCS2O14508 198 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SLC16A7O60669 478 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 KHDRBS3O75525 346 aaKnown RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 TXNDC12O95881 172 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 NGFP01138 241 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 COX5BP10606 129 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 CDKN2AP42771 156 aaKnown RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 GPR6P46095 362 aaPredicted RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 CCL8P80075 99 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 MXRA7P84157 204 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SPIBQ01892 262 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SPATA46Q5T0L3 261 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SMARCD3Q6STE5 483 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 KLF14Q8TD94 323 aaPredicted RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 C1orf159Q96HA4 380 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 C4orf45Q96LM5 186 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 CCT8L2Q96SF2 557 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 RACGAP1Q9H0H5 632 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 ELOVL3Q9HB03 270 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
USE1-201ENST00000263897 ZNF275Q9NSD4 429 aaPredicted RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 COA3Q9Y2R0 106 aaPredicted RBP13.72□□□□□ -0.21
USE1-201ENST00000263897 FBN1P35555 2871 aaKnown RBP13.71□□□□□ -0.21
USE1-201ENST00000263897 IMPA2O14732 288 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 RP2O75695 350 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 MT-ND5P03915 603 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 FABP3P05413 133 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 MPV17P39210 176 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 RPS6KA3P51812 740 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 PPP1CBP62140 327 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 LSM6P62312 80 aaKnown RBP13.71□□□□□ -0.21
USE1-201ENST00000263897 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 RFX4Q33E94 735 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms