RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GATAD2BQ8WXI9 593 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 TMIGD2Q96BF3 282 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 FBXO17Q96EF6 278 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 DMRTA2Q96SC8 542 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 FOXB1Q99853 325 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 CDADC1Q9BWV3 514 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 MRPS26Q9BYN8 205 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 ACOT13Q9NPJ3 140 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 TMEM38BQ9NVV0 291 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 SCOCQ9UIL1 159 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 LAMP5Q9UJQ1 280 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 PROCRQ9UNN8 238 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 MEMO1Q9Y316 297 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 LHFPL6Q9Y693 200 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 HIVEP3Q5T1R4 2406 aa8.55□□□□□ -1.04
SNRNP40-201ENST00000263694 IRGMA1A4Y4 181 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF99A8MXY4 864 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 E9PLN8 166 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 RPL36A-HNRNPH2H7BZ11 118 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 J3QLW9 94 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 CCL21O00585 134 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 RER1O15258 196 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 LYZL6O75951 148 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 IL18BPO95998 194 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 CLPTM1O96005 669 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 OR2T7P0C7T2 308 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF19P17023 458 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 MYL12AP19105 171 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ALOX5APP20292 161 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 MSR1P21757 451 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 GNLYP22749 145 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 IGHV1-2P23083 117 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 GUCA1AP43080 201 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 BLVRAP53004 296 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 TUBA1BP68363 451 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 TUBA4AP68366 448 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 MRPS34P82930 218 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 GALEQ14376 348 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 KCNMB1Q16558 191 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 HIKESHIQ53FT3 197 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF474Q6S9Z5 364 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 CFAP77Q6ZQR2 320 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 FOXL2NBQ6ZUU3 175 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 TUBA1AQ71U36 451 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 DCXRQ7Z4W1 244 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 LUZP2Q86TE4 346 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 FJX1Q86VR8 437 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 SLC22A24Q8N4F4 322 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 OR2T27Q8NH04 317 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 OTOSQ8NHW6 89 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 SPRYD4Q8WW59 207 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 VKORC1Q9BQB6 163 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ABHD6Q9BV23 337 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ALG8Q9BVK2 526 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 YIPF3Q9GZM5 350 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 NELFAQ9H3P2 528 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 SLCO1C1Q9NYB5 712 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 ASH2LQ9UBL3 628 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 MALT1Q9UDY8 824 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 CYB5R1Q9UHQ9 305 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 POLR1DQ9Y2S0 133 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 EXOSC1Q9Y3B2 195 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 RELNP78509 3460 aa8.54□□□□□ -1.04
SNRNP40-201ENST00000263694 A0A1W2PR80 420 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF503-AS2A6NEH8 195 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 OR6C65A6NJZ3 312 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 E9PI62 339 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF670-ZNF695F2Z2N8 137 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 LRRTM2O43300 516 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 RAD51DO75771 328 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 C1QL1O75973 258 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 LALBAP00709 142 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 HRGP04196 525 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 CRHP06850 196 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 HSMCR30P0CW71 290 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 OR8G3PP0DMU2 310 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 MPGP29372 298 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 PSMB10P40306 273 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 CASP6P55212 293 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 MED22Q15528 200 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 PCK2Q16822 640 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 FAM27BQ5VT28 67 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 SLC18B1Q6NT16 456 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF322Q6U7Q0 402 aaPredicted RBP8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 Q6ZT83 130 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 CXorf67Q86X51 503 aaPredicted RBP8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF433Q8N7K0 673 aaPredicted RBP8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZFP41Q8N8Y5 198 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 OR10S1Q8NGN2 331 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 JAM3Q9BX67 310 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 SIAEQ9HAT2 523 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 CHCHD3Q9NX63 227 aaKnown RBP8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF224Q9NZL3 707 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
SNRNP40-201ENST00000263694 LSM2Q9Y333 95 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms