RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 PTPRSQ13332 1948 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 OR5K4A6NMS3 321 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 KCNAB3O43448 404 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 SRPX2O60687 465 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 RAB3AP20336 220 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 RABIFP47224 123 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 IL10RAQ13651 578 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 NSDHLQ15738 373 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 VWA2Q5GFL6 755 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 OLFML2AQ68BL7 652 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 C16orf47Q6ZP98 133 aaPredicted RBP11.42□□□□□ -0.58
LIG1-201ENST00000263274 ZNF248Q8NDW4 579 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 C5orf34Q96MH7 638 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 LRFN5Q96NI6 719 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 POTEKPQ9BYX7 375 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 RTN4RQ9BZR6 473 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 APMAPQ9HDC9 416 aa11.42□□□□□ -0.58
LIG1-201ENST00000263274 LTBP2Q14767 1821 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 IL5P05113 134 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 AKR1C4P17516 323 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZP3P21754 424 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 HTR2CP28335 458 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CXADRP78310 365 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 PLCXD2Q0VAA5 305 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 ANKRD16Q6P6B7 361 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 FAM122BQ7Z309 247 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 SLC43A2Q8N370 569 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 OR1J4Q8NGS1 313 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CMTM3Q96MX0 182 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 SPACA5Q96QH8 159 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 SLC6A7Q99884 636 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 MRI1Q9BV20 369 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 POLR1DQ9Y2S0 133 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 TMEM272A0A1B0GTI8 110 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZNF736B4DX44 427 aaPredicted RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZNF749O43361 778 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 NDUFA2O43678 99 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 HLA-AP01891 365 aaKnown RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 GLAP06280 429 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 GABRA1P14867 456 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CPN1P15169 458 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 GABRG2P18507 467 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 RORAP35398 523 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 YPEL5P62699 121 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 SLC17A1Q14916 467 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 DEFB133Q30KQ1 61 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 GALNT16Q8N428 558 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 OR1J2Q8NGS2 313 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 OR10K1Q8NGX5 313 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CCDC107Q8WV48 283 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 UPB1Q9UBR1 384 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 GPR160Q9UJ42 338 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 LOC100289279A0A1B0GTE1 492 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 KANTRA0A1W2PQU2 76 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 C5orf51A6NDU8 294 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 PRAMEF26H0Y7S4 382 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZNF432O94892 652 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 WISP1O95388 367 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 OR4E1P0C645 316 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 CD34P28906 385 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 LUMP51884 338 aaPredicted RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
LIG1-201ENST00000263274 UBE2IP63279 158 aaKnown RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZNF117Q03924 483 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 C3orf33Q6P1S2 294 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 KCTD18Q6PI47 426 aaPredicted RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 MAMDC2Q7Z304 686 aaPredicted RBP11.41□□□□□ -0.58
LIG1-201ENST00000263274 ZNF584Q8IVC4 421 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 OTOSQ8NHW6 89 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 DZANK1Q9NVP4 752 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 KIF25Q9UIL4 384 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 VDAC3Q9Y277 283 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 KCNMB2Q9Y691 235 aa11.41□□□□□ -0.58
LIG1-201ENST00000263274 MAP1BP46821 2468 aaKnown RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 IGHV3-20A0A0C4DH32 117 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 OR2M5A3KFT3 312 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 DCNP07585 359 aaKnown RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 CTLA4P16410 223 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 MST1P26927 711 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 SLC25A1P53007 311 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 RPS4XP62701 263 aaKnown RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 ZNF169Q14929 603 aaPredicted RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 EXOSC6Q5RKV6 272 aaKnown RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 UNQ6126/PRO20091Q6UXV3 157 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 GPBAR1Q8TDU6 330 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 PNPLA2Q96AD5 504 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 NUDT22Q9BRQ3 303 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 NCOR1O75376 2440 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 IGHV5-51A0A0C4DH38 117 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 EPOPA6NHQ4 379 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 PRSS44E7EML9 344 aa11.4□□□□□ -0.58
LIG1-201ENST00000263274 F5H0A9 414 aaPredicted RBP11.4□□□□□ -0.58
LIG1-201ENST00000263274 H3BML4 177 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms