RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MARCH3Q86UD3 253 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 LINC00518Q8N0U6 118 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 KCNRGQ8N5I3 272 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 ELSPBP1Q96BH3 223 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 CMBLQ96DG6 245 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 SLC25A44Q96H78 314 aaPredicted RBP15.73■□□□□ 0.11
TRAM1-201ENST00000262213 OR8B4Q96RC9 309 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 TSNAXQ99598 290 aaKnown RBP15.73■□□□□ 0.11
TRAM1-201ENST00000262213 C1orf198Q9H425 327 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 ARID1AO14497 2285 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 LMX1BO60663 402 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 SKP2Q13309 424 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 TOMM34Q15785 309 aaPredicted RBP15.73■□□□□ 0.11
TRAM1-201ENST00000262213 STK11Q15831 433 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 SLC22A6Q4U2R8 563 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 ARMC6Q6NXE6 501 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 PARM1Q6UWI2 310 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 FGF14Q92915 247 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 SLC41A2Q96JW4 573 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 ADOQ96SZ5 270 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 CKLFQ9UBR5 152 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 EPHA6Q9UF33 1036 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 FBXO9Q9UK97 447 aaPredicted RBP15.73■□□□□ 0.11
TRAM1-201ENST00000262213 KLK13Q9UKR3 277 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 TNFSF18Q9UNG2 199 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 VSIG4Q9Y279 399 aa15.73■□□□□ 0.11
TRAM1-201ENST00000262213 BCL2L11O43521 198 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 VAMP1P23763 118 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 CXADRP78310 365 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 ADAM8P78325 824 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 PMPCAQ10713 525 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 OR7A5Q15622 319 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 CLVS2Q5SYC1 327 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 FBXO46Q6PJ61 603 aaPredicted RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 MOB3CQ70IA8 216 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 FAM160A2Q8N612 972 aaPredicted RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 OR13C8Q8NGS7 320 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 METTL21AQ8WXB1 218 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 HERVK_113Q902F9 699 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 MMABQ96EY8 250 aaPredicted RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 RTN4RQ9BZR6 473 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 PNO1Q9NRX1 252 aaKnown RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 PCDHB10Q9UN67 800 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 MRPS33Q9Y291 106 aaKnown RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 YBX2Q9Y2T7 364 aaKnown RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 OR2AT4A6NND4 320 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 ZNF264O43296 627 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 NDUFA2O43678 99 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 MPZL1O95297 269 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 APEHP13798 732 aaKnown RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 MAOBP27338 520 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 BDKRB2P30411 391 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 SCAND1P57086 179 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 PPIAP62937 165 aaKnown RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 OR52W1Q6IF63 320 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 Q6ZSR6 202 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 GVQW1Q8N7I0 195 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 TMEM229BQ8NBD8 167 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 CHST4Q8NCG5 386 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 FAM174AQ8TBP5 190 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 FAM46BQ96A09 425 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 SLC25A21Q9BQT8 299 aaPredicted RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 NRSN2Q9GZP1 204 aa15.72■□□□□ 0.11
TRAM1-201ENST00000262213 ALX4Q9H161 411 aaPredicted RBP15.72■□□□□ 0.11
TRAM1-201ENST00000262213 DOCK8Q8NF50 2099 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 RNF222A6NCQ9 220 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 CLDN4O14493 209 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 UTS2O95399 124 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 GP1BAP07359 652 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 DNASE1L1P49184 302 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 FGL1Q08830 312 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 SNTB1Q13884 538 aaKnown RBP15.71■□□□□ 0.11
TRAM1-201ENST00000262213 EIF2B1Q14232 305 aaKnown RBP15.71■□□□□ 0.11
TRAM1-201ENST00000262213 RAB12Q6IQ22 244 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 CORO6Q6QEF8 472 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 ASB5Q8WWX0 329 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 GAL3ST4Q96RP7 486 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 UBQLN4Q9NRR5 601 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 C13orf42A0A1B0GVH6 325 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 A0A1W2PQF6 199 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 HCRTR2O43614 444 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 ZNF735P0CB33 412 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 AKR1C4P17516 323 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 PPP1R1AQ13522 171 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 ZNF584Q8IVC4 421 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 ZNF440Q8IYI8 595 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 CST11Q9H112 138 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 NXF5Q9H1B4 397 aaKnown RBP15.71■□□□□ 0.11
TRAM1-201ENST00000262213 PRELID3BQ9Y3B1 194 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 TMED7Q9Y3B3 224 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 PCNX3Q9H6A9 2034 aa15.71■□□□□ 0.11
TRAM1-201ENST00000262213 OR14I1A6ND48 311 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 FADS1O60427 444 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 TPPPO94811 219 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 TXNDC12O95881 172 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 F12P00748 615 aaPredicted RBP15.7■□□□□ 0.1
TRAM1-201ENST00000262213 CD2P06729 351 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 CXCR1P25024 350 aa15.7■□□□□ 0.1
TRAM1-201ENST00000262213 GPM6BQ13491 265 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms