RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF766Q5HY98 468 aa19.84■□□□□ 0.77
SIX3-201ENST00000260653 PHYHD1Q5SRE7 291 aa19.84■□□□□ 0.77
SIX3-201ENST00000260653 TMEM123Q8N131 208 aa19.84■□□□□ 0.77
SIX3-201ENST00000260653 PARP16Q8N5Y8 322 aa19.84■□□□□ 0.77
SIX3-201ENST00000260653 CEP19Q96LK0 163 aa19.84■□□□□ 0.77
SIX3-201ENST00000260653 OR4C45A6NMZ5 311 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 HSPB2A8KAH6 182 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 LINC01387J3KSC0 135 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 CDK2AP1O14519 115 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 CSNK1A1P48729 337 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 SELENOPP49908 381 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 LHX2P50458 406 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 OR10A3P58181 314 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 HSPB2Q16082 182 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 ODF4Q2M2E3 257 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 YIF1BQ5BJH7 314 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 OR6N1Q8NGY5 312 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 RNF128Q8TEB7 428 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 ORAI1Q96D31 301 aa19.83■□□□□ 0.77
SIX3-201ENST00000260653 SF3B5Q9BWJ5 86 aaKnown RBP19.83■□□□□ 0.77
SIX3-201ENST00000260653 ACOD1A6NK06 481 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 TAF4O00268 1085 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 GATBO75879 557 aaKnown RBP19.83■□□□□ 0.76
SIX3-201ENST00000260653 ZNF432O94892 652 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 PNPP00491 289 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 UCHL1P09936 223 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 KIR3DL2P43630 455 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 PPIAP62937 165 aaKnown RBP19.83■□□□□ 0.76
SIX3-201ENST00000260653 SRYQ05066 204 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 DEFB109BQ30KR1 87 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 WDR38Q5JTN6 314 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 PAMR1Q6UXH9 720 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 SYT9Q86SS6 491 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 TEX19Q8NA77 164 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 ZFP62Q8NB50 900 aaPredicted RBP19.83■□□□□ 0.76
SIX3-201ENST00000260653 AP3S1Q92572 193 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 SCMH1Q96GD3 660 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 C4orf45Q96LM5 186 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 ABCB9Q9NP78 766 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 CYB5R1Q9UHQ9 305 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 PAIP2BQ9ULR5 123 aaKnown RBP19.83■□□□□ 0.76
SIX3-201ENST00000260653 CMAHPQ9Y471 501 aa19.83■□□□□ 0.76
SIX3-201ENST00000260653 ZNF716A6NP11 495 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 ITGB2P05107 769 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 PPP5CP53041 499 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 SPANXN2Q5MJ10 180 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 ABLIM2Q6H8Q1 611 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 ATF6BQ99941 703 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 MIXL1Q9H2W2 232 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 FBXL3Q9UKT7 428 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 FLVCR1Q9Y5Y0 555 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 PRRC2CQ9Y520 2896 aaKnown RBP19.82■□□□□ 0.76
SIX3-201ENST00000260653 ETV6P41212 452 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 TNFSF10P50591 281 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 RIDAP52758 137 aaKnown RBP19.82■□□□□ 0.76
SIX3-201ENST00000260653 CLDN18P56856 261 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 IFITM3Q01628 133 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 MFGE8Q08431 387 aaPredicted RBP19.82■□□□□ 0.76
SIX3-201ENST00000260653 CBX3Q13185 183 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 HYAL4Q2M3T9 481 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 UNQ9370/PRO34162Q6UXP9 181 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 RDH10Q8IZV5 341 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 CPNE4Q96A23 557 aaPredicted RBP19.82■□□□□ 0.76
SIX3-201ENST00000260653 DCBLD2Q96PD2 775 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 NOX4Q9NPH5 578 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 GTF2A1LQ9UNN4 478 aa19.82■□□□□ 0.76
SIX3-201ENST00000260653 ZNF891A8MT65 544 aaPredicted RBP19.81■□□□□ 0.76
SIX3-201ENST00000260653 ZNF879B4DU55 563 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 PIN1P1O15428 100 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 ARL6IP5O75915 188 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 NTF4P34130 210 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 ZNF45Q02386 682 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 NHLH1Q02575 133 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 ZNF676Q8N7Q3 588 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 TMEM54Q969K7 222 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 SLC30A2Q9BRI3 323 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 UGT2A1Q9Y4X1 527 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 LHFPL6Q9Y693 200 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 DCDC2BA2VCK2 349 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 H3BSH0 61 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 TMCC2O75069 709 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 FDX2Q6P4F2 183 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 TPRA1Q86W33 373 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 OR10AC1Q8NH08 325 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 COMMD3Q9UBI1 195 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 SLC22A13Q9Y226 551 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 B3GNT3Q9Y2A9 372 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 POLR1DQ9Y2S0 133 aa19.81■□□□□ 0.76
SIX3-201ENST00000260653 TMEM212A6NML5 194 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 CD40LGP29965 261 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 RASGEF1BQ0VAM2 473 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 DDI2Q5TDH0 399 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 TMEM178AQ8NBL3 297 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 ABHD3Q8WU67 409 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 PPP1R14AQ96A00 147 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 COMMD4Q9H0A8 199 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 TIGARQ9NQ88 270 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 CENPMQ9NSP4 180 aa19.8■□□□□ 0.76
SIX3-201ENST00000260653 FOXD3Q9UJU5 478 aaPredicted RBP19.8■□□□□ 0.76
SIX3-201ENST00000260653 KLK13Q9UKR3 277 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms