RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMCC3Q9ULS5 477 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 CACNA1DQ01668 2161 aa14.71□□□□□ -0.05
SDCBP-201ENST00000260130 TRAV27A0A087WT01 109 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 SIAH2O43255 324 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 KLF4O43474 513 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 GRK5P34947 590 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 LIMS1P48059 325 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 TPTEP56180 551 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 DEFA1P59665 94 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 DEFA3P59666 94 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 FHL1Q13642 323 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 MELKQ14680 651 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 PPA1Q15181 289 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 SSX8Q7RTT4 187 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 AKAP14Q86UN6 197 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 PARP16Q8N5Y8 322 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 OR9Q2Q8NGE9 314 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 OR13C2Q8NGS9 318 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 SLC25A44Q96H78 314 aaPredicted RBP14.7□□□□□ -0.06
SDCBP-201ENST00000260130 CHCHD6Q9BRQ6 235 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 CRLF2Q9HC73 371 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 GPR35Q9HC97 309 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 HSMCR30P0CW71 290 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 PTGES3Q15185 160 aaKnown RBP14.7□□□□□ -0.06
SDCBP-201ENST00000260130 ACKR1Q16570 336 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 PHYHD1Q5SRE7 291 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 C17orf78Q8N4C9 275 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 OR6N1Q8NGY5 312 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 PIK3IP1Q96FE7 263 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 BOD1Q96IK1 185 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 LURAP1Q96LR2 239 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 NGBQ9NPG2 151 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 B3GAT2Q9NPZ5 323 aa14.7□□□□□ -0.06
SDCBP-201ENST00000260130 ETV6P41212 452 aa14.69□□□□□ -0.06
SDCBP-201ENST00000260130 DAP3P51398 398 aaKnown RBP14.69□□□□□ -0.06
SDCBP-201ENST00000260130 PRPS1P60891 318 aa14.69□□□□□ -0.06
SDCBP-201ENST00000260130 BEX5Q5H9J7 111 aa14.69□□□□□ -0.06
SDCBP-201ENST00000260130 SPANXN2Q5MJ10 180 aa14.69□□□□□ -0.06
SDCBP-201ENST00000260130 CENPOQ9BU64 300 aa14.69□□□□□ -0.06
SDCBP-201ENST00000260130 NPIPB13A6NJU9 1138 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ZAR1LA6NP61 321 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 NPIPB4C9JG80 1138 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 MCIDASD6RGH6 385 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 LOC110117498-PIK3R3F6TDL0 507 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 OR10H3O60404 316 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CSNK1A1P48729 337 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CEACAM16Q2WEN9 425 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 PTCHD4Q6ZW05 846 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 HDDC2Q7Z4H3 204 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ZER1Q7Z7L7 766 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CDC20BQ86Y33 519 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 LRRC75AQ8NAA5 344 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 OR1K1Q8NGR3 316 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 OR52N5Q8NH56 324 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ASB10Q8WXI3 467 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 GTPBP3Q969Y2 492 aaKnown RBP14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ZNF837Q96EG3 531 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-201ENST00000260130 TXNIPQ9H3M7 391 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 SLC17A5Q9NRA2 495 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 SLC25A15Q9Y619 301 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CSMD2Q7Z408 3487 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CCRL2O00421 344 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 PTP4A3O75365 173 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 PIPP12273 146 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-201ENST00000260130 IFNGR2P38484 337 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CRISP1P54107 249 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CTXN1P60606 82 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 MED22Q15528 200 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 KCNJ8Q15842 424 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ANKRD16Q6P6B7 361 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 WDR31Q8NA23 367 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 AQP11Q8NBQ7 271 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 TMEM54Q969K7 222 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 Q96MT0 163 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 MGLLQ99685 303 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 GPA33Q99795 319 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 ULBP2Q9BZM5 246 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 GLTPQ9NZD2 209 aa14.68□□□□□ -0.06
SDCBP-201ENST00000260130 CRNNQ9UBG3 495 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-201ENST00000260130 A0A1W2PR80 420 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 IGHG1P01857 330 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 APOA1P02647 267 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 PGA4P0DJD7 388 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 PGA3P0DJD8 388 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 HOXC12P31275 282 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 ARF1P84077 181 aaKnown RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 HIKESHIQ53FT3 197 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 CCDC92Q53HC0 331 aaPredicted RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 ARMC4Q5T2S8 1044 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 TMEM53Q6P2H8 277 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 KLHL17Q6TDP4 642 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 SEZ6L2Q6UXD5 910 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 BCL2L2Q92843 193 aaPredicted RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 PLPPR2Q96GM1 343 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 NUAK2Q9H093 628 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 RNF167Q9H6Y7 350 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 SIGLEC7Q9Y286 467 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 AMDHD2Q9Y303 409 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 CSMD1Q96PZ7 3565 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms