RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 DDX60Q8IY21 1712 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ANKRD36CQ5JPF3 1778 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TMEM218A2RU14 115 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 RAB27BO00194 218 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 LRP3O75074 770 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ALOX5APP20292 161 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF140P52738 457 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 MLF1P58340 268 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 MRPL2Q5T653 305 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SCD5Q86SK9 330 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 MARF1Q9Y4F3 1742 aaKnown RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A6P0DMU7 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A5P0DMU8 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A7P0DMV0 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TRIM61Q5EBN2 209 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ESPNLQ6ZVH7 1005 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TPPP3Q9BW30 176 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 WWTR1Q9GZV5 400 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SIRT3Q9NTG7 399 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 PEX12O00623 359 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 F13BP05160 661 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TAZQ16635 292 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 PRR27Q6MZM9 219 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CMTM2Q8TAZ6 248 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 NMNAT3Q96T66 252 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 TEAD3Q99594 435 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CCDC187A0A096LP49 1063 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 IFITM5A6NNB3 132 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 H0YIV9 168 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 IRF2P14316 349 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 ABCD3P28288 659 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 OR1D4P47884 311 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 CSNK1A1P48729 337 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 FIGLAQ6QHK4 219 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 Q6ZN92 141 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 FBXL6Q8N531 539 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 NPAS1Q99742 590 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PLEKHF2Q9H8W4 249 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 GJE1A6NN92 205 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 TGM5O43548 720 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 TBX19O60806 448 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 CD3DP04234 171 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 SUOXP51687 545 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 MANEAQ5SRI9 462 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PAQR6Q6TCH4 344 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 DPY19L2P2Q6ZN68 376 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 OR5M1Q8NGP8 315 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 THAP3Q8WTV1 239 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PACRGQ96M98 296 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 CHRDL1Q9BU40 450 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 ZNF552Q9H707 407 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 A4GALTQ9NPC4 353 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 MYOTQ9UBF9 498 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PADI1Q9ULC6 663 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 APC2O95996 2303 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 ZNF814B7Z6K7 855 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 TCF21O43680 179 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 CST4P01036 141 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PMCHP20382 165 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 UBE2G1P62253 170 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PLGLAQ15195 96 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 ASB11Q8WXH4 323 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 PEX11GQ96HA9 241 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 ACER3Q9NUN7 267 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 MYH4Q9Y623 1939 aa12.08□□□□□ -0.48
PCDHGA3-201ENST00000253812 HMSDA8MTL9 139 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 K7EQM0 130 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 IGHG1P01857 330 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 AOAHP28039 575 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 FAAP20Q6NZ36 180 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 VWA1Q6PCB0 445 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 OR14A16Q8NHC5 309 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 NEURL3Q96EH8 262 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 RSRP1Q9BUV0 290 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 H3BML4 177 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 CFIP05156 583 aa12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 ACAA1P09110 424 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA3-201ENST00000253812 DCTDP32321 178 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms