RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SPATA46Q5T0L3 261 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 ARL9Q6T311 187 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 ARPINQ7Z6K5 226 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 SYT9Q86SS6 491 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 OAFQ86UD1 273 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 MEX3DQ86XN8 651 aaKnown RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 NRMQ8IXM6 262 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 OFCC1Q8IZS5 231 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 LRRC75AQ8NAA5 344 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 KLF14Q8TD94 323 aaPredicted RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 ZNF418Q8TF45 676 aaPredicted RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 IPCEF1Q8WWN9 437 aaPredicted RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 GTF3AQ92664 365 aaKnown RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 WACQ9BTA9 647 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 OR2J1Q9GZK6 312 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 WNT5BQ9H1J7 359 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 CGGBP1Q9UFW8 167 aaPredicted RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 RRP15Q9Y3B9 282 aaKnown RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 EFCAB9A8MZ26 197 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 H3BSA7 217 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 PLPP2O43688 288 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 ICMTO60725 284 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 VENTXO95231 258 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 IGHV1-46P01743 117 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 MPV17P39210 176 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 ARHGDIAP52565 204 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 PPP1CBP62140 327 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 SLC3A1Q07837 685 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 CGB2Q6NT52 195 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 FOXL2NBQ6ZUU3 175 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 IGFN1Q86VF2 1251 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 CLDN22Q8N7P3 220 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 RP9Q8TA86 221 aaKnown RBP17.9■□□□□ 0.46
NEDD8-201ENST00000250495 ABHD4Q8TB40 342 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 CCL17Q92583 94 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 DIRC2Q96SL1 478 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 G6PC2Q9NQR9 355 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 CMTM6Q9NX76 183 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 RHCGQ9UBD6 479 aa17.9■□□□□ 0.46
NEDD8-201ENST00000250495 WNK2Q9Y3S1 2297 aa17.89■□□□□ 0.46
NEDD8-201ENST00000250495 TRAV27A0A087WT01 109 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 A0A0G2JMP0 313 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 A0A0X1KG70 313 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 A0A1W2PPL8 197 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 C12orf71A8MTZ7 269 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 DEAF1O75398 565 aaPredicted RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 IGHV2-5P01817 119 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ADH4P08319 380 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 MSR1P21757 451 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ZMAT1Q5H9K5 638 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ZNF774Q6NX45 483 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 THSD4Q6ZMP0 1018 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 VTCN1Q7Z7D3 282 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 OR4M2Q8NGB6 313 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 GEMIN6Q8WXD5 167 aaKnown RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ACOT11Q8WXI4 607 aaPredicted RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 RCN3Q96D15 328 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 C4orf45Q96LM5 186 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ELAC2Q9BQ52 826 aaKnown RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 MAN2C1Q9NTJ4 1040 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 KLHL21Q9UJP4 597 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 ZDHHC8Q9ULC8 765 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 NDRG4Q9ULP0 352 aaKnown RBP17.89■□□□□ 0.45
NEDD8-201ENST00000250495 SNX13Q9Y5W8 968 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 CACNG2Q9Y698 323 aa17.89■□□□□ 0.45
NEDD8-201ENST00000250495 J3KTA2 159 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 NGFP01138 241 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 IFI44LQ53G44 452 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 C12orf54Q6X4T0 127 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 ZNF730Q6ZMV8 503 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 RFPL4BQ6ZWI9 263 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 RRM2BQ7LG56 351 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 ZER1Q7Z7L7 766 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 PEG10Q86TG7 708 aaKnown RBP17.88■□□□□ 0.45
NEDD8-201ENST00000250495 SLC15A3Q8IY34 581 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 GRHPRQ9UBQ7 328 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 PCDHB10Q9UN67 800 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 ARL2BPQ9Y2Y0 163 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 ANK2Q01484 3957 aa17.88■□□□□ 0.45
NEDD8-201ENST00000250495 A0A087WUU8 490 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 J3QLI3 93 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 CXCR6O00574 342 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 FFAR1O14842 300 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 GSTA4O15217 222 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 AHCYL1O43865 530 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 UBOX5O94941 541 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 ZNF682O95780 498 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 FUT4P22083 530 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 TUBG1P23258 451 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 RPL4P36578 427 aaKnown RBP17.87■□□□□ 0.45
NEDD8-201ENST00000250495 LIPEQ05469 1076 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 FHL1Q13642 323 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 ENDOGQ14249 297 aaKnown RBP17.87■□□□□ 0.45
NEDD8-201ENST00000250495 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 MBOAT2Q6ZWT7 520 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 FKBP9P1Q75LS8 142 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 CBLL1Q75N03 491 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 POU5F2Q8N7G0 328 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 SEMA6DQ8NFY4 1073 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms