RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MFSD13AQ14CX5 517 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 C17orf82Q86X59 251 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 SLC25A28Q96A46 364 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 GAL3ST4Q96RP7 486 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 PTTG3PQ9NZH4 202 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 CYB5R1Q9UHQ9 305 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 KIF26BQ2KJY2 2108 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 IGLV1-36A0A0B4J1U3 117 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 WIPF3A6NGB9 483 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 FRG2CA6NGY1 282 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 FAM74A7A6NL05 159 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 XRCC3O43542 346 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 LMX1BO60663 402 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 RBBP9O75884 186 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 RAB40ALP0C0E4 278 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 RRASP10301 218 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 CPN1P15169 458 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 CFPP27918 469 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 LUMP51884 338 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 FAM74A3Q4VXF1 159 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 B3GNTL1Q67FW5 361 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 OR7E24Q6IFN5 339 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 LRFN4Q6PJG9 635 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 GSG1LQ6UXU4 331 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ARMC10Q8N2F6 343 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ESX1Q8N693 406 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 PLPP7Q8NBV4 271 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 RAB40AQ8WXH6 277 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 NSMAFQ92636 917 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 OR11A1Q9GZK7 315 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ATPIF1Q9UII2 106 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 GPR160Q9UJ42 338 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 RHBDD3Q9Y3P4 386 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 A0A1W2PR77 199 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 GGT3PA6NGU5 568 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 H0YIG0 161 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 H7C417 338 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 HCRTR2O43614 444 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 SULT1B1O43704 296 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 TSPAN2O60636 221 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 S100A11P31949 105 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 GALNSP34059 522 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 AP3S2P59780 193 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ACKR1Q16570 336 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DEFB133Q30KQ1 61 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 TEX30Q5JUR7 227 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ANKRD16Q6P6B7 361 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ZNF546Q86UE3 836 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 COMMD2Q86X83 199 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ZNF440Q8IYI8 595 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 PRSS58Q8IYP2 241 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 KDM8Q8N371 416 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 C12orf57Q99622 126 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 SOHLH2Q9NX45 425 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 MTFP1Q9UDX5 166 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 PRODH2Q9UF12 536 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 STEAP1Q9UHE8 339 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 B9D1Q9UPM9 204 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 UNC13CQ8NB66 2214 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 IGKV1D-43A0A0B4J1Z2 117 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 A0A1B0GW55 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ACOT7O00154 380 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 SRSF10O75494 262 aaKnown RBP9.09□□□□□ -0.95
COPB1-201ENST00000249923 RLN2P04090 185 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L2P0CJ85 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L3P0CJ86 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L4P0CJ87 422 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L5P0CJ88 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L6P0CJ89 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4L7P0CJ90 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 MYF5P13349 255 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 IFNGR1P15260 489 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 NME1P15531 152 aaKnown RBP9.09□□□□□ -0.95
COPB1-201ENST00000249923 ANOS1P23352 680 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 POU3F4P49335 361 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 EGR3Q06889 387 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 OR7A5Q15622 319 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 NHLRC3Q5JS37 347 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 CLLU1Q5K131 121 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 METTL11BQ5VVY1 283 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 FAM220AQ7Z4H9 259 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 SPICQ8N5J4 248 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 OR51A2Q8NGJ7 313 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ZNF563Q8TA94 476 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 ELOVL3Q9HB03 270 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 DUX4Q9UBX2 424 aa9.09□□□□□ -0.95
COPB1-201ENST00000249923 IGHV1OR15-9A0A0B4J2B8 117 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 DCDC2BA2VCK2 349 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 F8W036 122 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 TACSTD2P09758 323 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 EPHA4P54764 986 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
COPB1-201ENST00000249923 GK2Q14410 553 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms