RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 IGFBP3P17936 291 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 RAP1BP61224 184 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 RAP1AP62834 184 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 ACY1Q03154 408 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR4C16Q8NGL9 310 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 ST7LQ8TDW4 575 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 CLDN23Q96B33 292 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLX1AQ9BQ83 275 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 DIABLOQ9NR28 239 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 CA10Q9NS85 328 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 CDV3Q9UKY7 258 aaKnown RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 PPIEQ9UNP9 301 aaKnown RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 PI4KAP42356 2102 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 RALGAPA1Q6GYQ0 2036 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 LY6G6EA0A0G2JKS1 128 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 A0A1W2PPC1 479 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 MEIS3P1A6NDR6 274 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 TTLL8A6PVC2 850 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 H3BML4 177 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 FOSL2P15408 326 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 SSTR2P30874 369 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 TLE3Q04726 772 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 CSRP2Q16527 193 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR51A2Q8NGJ7 313 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 CITED4Q96RK1 184 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 G6PC2Q9NQR9 355 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 R4GMQ9 66 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 U3KQA8 63 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 WDFY3Q8IZQ1 3526 aa17.48■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF823P16415 610 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 DAP3P51398 398 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 MECP2P51608 486 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 SUMO3P55854 103 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 HSF1Q00613 529 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 PCK2Q16822 640 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CORO6Q6QEF8 472 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 RNF138Q8WVD3 245 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLC25A44Q96H78 314 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CHST11Q9NPF2 352 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF69Q9UC07 566 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 LOC101059948A0A1B0GTJ6 334 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 PYCARD-AS1I3L0S3 204 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CD2P06729 351 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 FCER2P06734 321 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF24P17028 368 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 DLX5P56178 289 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CCL7P80098 99 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 C19orf57Q0VDD7 668 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 SQSTM1Q13501 440 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 MFSD13AQ14CX5 517 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 LCN10Q6JVE6 187 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 LRFN4Q6PJG9 635 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF680Q8NEM1 530 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 SORCS2Q96PQ0 1159 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CHIAQ9BZP6 476 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 FSCN3Q9NQT6 498 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 KLRF1Q9NZS2 232 aa17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 EIF3KQ9UBQ5 218 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 CGGBP1Q9UFW8 167 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 PHF3Q92576 2039 aaKnown RBP17.47■□□□□ 0.39
CDC42EP1-201ENST00000249014 ARPC4-TTLL3A0A0A6YYG9 625 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 CCDC85CA6NKD9 419 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF208O43345 1280 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 LMX1BO60663 402 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 FSTP19883 344 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF81P51508 661 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 EMP2P54851 167 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 DCDP81605 110 aaKnown RBP17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 GLYATL3Q5SZD4 288 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF385CQ66K41 422 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF626Q68DY1 528 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 TSSK4Q6SA08 328 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR52B4Q8NGK2 314 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 DDIT4LQ96D03 193 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 MED30Q96HR3 178 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 EMC6Q9BV81 110 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 ATG5Q9H1Y0 275 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 CDCP1Q9H5V8 836 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 PIPOXQ9P0Z9 390 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 MGAT4CQ9UBM8 478 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 CKLFQ9UBR5 152 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR52A1Q9UKL2 312 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 IGHV5-10-1A0A0J9YXX1 117 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 LIPT2A6NK58 231 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 CSF1P09603 554 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 VSIG10L2P0DP72 767 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 CPN1P15169 458 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 EPHA8P29322 1005 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 PTGDSP41222 190 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 GLT8D1Q68CQ7 371 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 DNM1P34Q6PK57 102 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR13C3Q8NGS6 347 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 C5orf34Q96MH7 638 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLC17A5Q9NRA2 495 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 HHLA2Q9UM44 414 aa17.46■□□□□ 0.39
CDC42EP1-201ENST00000249014 LOC107986453A0A1B0GWG9 222 aa17.45■□□□□ 0.38
CDC42EP1-201ENST00000249014 VSTM2BA6NLU5 285 aa17.45■□□□□ 0.38
CDC42EP1-201ENST00000249014 MPC2O95563 127 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms