RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 FRG2CA6NGY1 282 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 OR6C70A6NIJ9 312 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KLRC4-KLRK1H3BQV0 150 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 LYRM1O43325 122 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NEURL1O76050 574 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SLC2A1P11166 492 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 IFNGR1P15260 489 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 GNALP38405 381 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KIR2DL3P43628 341 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 EVX1P49640 407 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NANOS3P60323 173 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SNRPD2P62316 118 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ACTC1P68032 377 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ACTA1P68133 377 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 C1orf140Q5VVS0 124 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MZT2BQ6NZ67 158 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 GRAMD2AQ8IUY3 354 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF440Q8IYI8 595 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 OR5AK2Q8NH90 309 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 LGALS14Q8TCE9 139 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 TXNDC15Q96J42 360 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 AMELYQ99218 206 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 THAP7Q9BT49 309 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CCDC32Q9BV29 185 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SP140LQ9H930 580 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NRIP3Q9NQ35 241 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MYOTQ9UBF9 498 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 TINAGQ9UJW2 476 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF222Q9UK12 451 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 BAIAP2Q9UQB8 552 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KLF13Q9Y2Y9 288 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 A0A1W2PPL8 197 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 PRR32B1ATL7 298 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NPIPB9F8W1W9 429 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CSN2P05814 226 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF823P16415 610 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ATF1P18846 271 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CASP3P42574 277 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 RFX2P48378 723 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 GALK2Q01415 458 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MESTQ5EB52 335 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NUP54Q7Z3B4 507 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NAXEQ8NCW5 288 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 OR4K17Q8NGC6 315 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 INTS14Q96SY0 518 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF649Q9BS31 505 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MRPS18AQ9NVS2 196 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KLHL21Q9UJP4 597 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 INTS1Q8N201 2190 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 POLQO75417 2590 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CENPXA8MT69 81 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 H0YC42 278 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 IDH3BO43837 385 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KHDRBS3O75525 346 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ARL6IP5O75915 188 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 GLCEO94923 617 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MT-ND4P03905 459 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CLPSP04118 112 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SDHAP31040 664 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CAPZA2P47755 286 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CCR6P51684 374 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF41P51814 821 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 TMEM176BQ3YBM2 270 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 BCL2L15Q5TBC7 163 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SULF2Q8IWU5 870 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MS4A15Q8N5U1 240 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ZBTB8BQ8NAP8 495 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 RASL10BQ96S79 203 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ABHD1Q96SE0 405 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SLX1AQ9BQ83 275 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NXF2Q9GZY0 626 aaKnown RBP7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SLITRK2Q9H156 845 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 NEK6Q9HC98 313 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 SLCO1C1Q9NYB5 712 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 KLHL13Q9P2N7 655 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 A3GALT2U3KPV4 340 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 MYO9AB2RTY4 2548 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
VPS4B-201ENST00000238497 CRYBG3Q68DQ2 2970 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 IGHV3-15A0A0B4J1V0 119 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 PLA2G10O15496 165 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 SEC14L5O43304 696 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 SLC19A2O60779 497 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 IGKV3-11P04433 115 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 P04436 131 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TACSTD2P09758 323 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 FGF9P31371 208 aaPredicted RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ACTA2P62736 377 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ACTG2P63267 376 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 DGCR2P98153 550 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 EIF2B1Q14232 305 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 CDK5R1Q15078 307 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TATDN3Q17R31 274 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 H3F3CQ6NXT2 135 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 RPUSD3Q6P087 351 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ADGRG3Q86Y34 549 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms