RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM18Q96B42 140 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TIMM29Q9BSF4 260 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MARCH5Q9NX47 278 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 CTNSO60931 367 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MVDP53602 400 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 OR9A4Q8NGU2 314 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 C2orf50Q96LR7 162 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 VPS25Q9BRG1 176 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 LDAHQ9H6V9 325 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM202A6NGA9 273 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 IGHG1P01857 330 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 LIMS3P0CW19 117 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 LIMS4P0CW20 117 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 NID1P14543 1247 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 CDK5Q00535 292 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MRPL49Q13405 166 aaKnown RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MPPED2Q15777 294 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 ZNF626Q68DY1 528 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 UBAC2Q8NBM4 344 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TP53TG5Q9Y2B4 290 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 PCDHGA1Q9Y5H4 931 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 LILRB3O75022 631 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 FGF7P21781 194 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 HHEXQ03014 270 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 DUSP5Q16690 384 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 B3GNTL1Q67FW5 361 aaPredicted RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 NHLRC1Q6VVB1 395 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 TRILQ7L0X0 811 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 SUMF1Q8NBK3 374 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 APOOQ9BUR5 198 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 NXF2Q9GZY0 626 aaKnown RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MED9Q9NWA0 146 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 SULT1A3P0DMM9 295 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 SULT1A4P0DMN0 295 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 MSMO1Q15800 293 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 C15orf54Q8N8G6 183 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 OR6K3Q8NGY3 331 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 DIO2Q92813 273 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 EDAQ92838 391 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
HCFC2-201ENST00000229330 SLC35A4Q96G79 324 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 BARHL1Q9BZE3 327 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 GDE1Q9NZC3 331 aa12.63□□□□□ -0.39
HCFC2-201ENST00000229330 CDK2AP1O14519 115 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 SDHBP21912 280 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 DUSP1P28562 367 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 PLGLB1Q02325 96 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 ZNF542PQ5EBM4 170 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 OR52W1Q6IF63 320 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 ZNF761Q86XN6 746 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 OR5AP2Q8NGF4 316 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 PHOSPHO2Q8TCD6 241 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 SGPP1Q9BX95 441 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 WSB2Q9NYS7 404 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 GNG13Q9P2W3 67 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 A4GNTQ9UNA3 340 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 A0A087WV62 115 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 YY2O15391 372 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 HMGA2P52926 109 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 MTCP1P56278 107 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 ARHGAP11BQ3KRB8 267 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 MUC20Q8N307 709 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 NECAP2Q9NVZ3 263 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 C20orf202A1L168 122 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 GPR31O00270 319 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 KLK3P07288 261 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 GABRA1P14867 456 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 AADACP22760 399 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 DPP4P27487 766 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 PHLDA2Q53GA4 152 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM65Q6PI78 240 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 IL1F10Q8WWZ1 152 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 DDAH2O95865 285 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TBPP20226 339 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 TRHRP34981 398 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-201ENST00000229330 SNCAP37840 140 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 DBX2Q6ZNG2 339 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 VN1R3Q9BXE9 311 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms