RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SERPINF1P36955 418 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 TSFMP43897 325 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 MRM1Q6IN84 353 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CPEB2Q7Z5Q1 589 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 MIB2Q96AX9 1013 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 NXF2Q9GZY0 626 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 NTMQ9P121 344 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SUSD2Q9UGT4 822 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 NEUROG3Q9Y4Z2 214 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
NFKB1-201ENST00000226574 A0A1B0GUH1 482 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SLC22A23A1A5C7 686 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 K7EPK0 472 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SULT1B1O43704 296 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 FCGR2AP12318 317 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 BDH1Q02338 343 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 PHLDA2Q53GA4 152 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 C1QL3Q5VWW1 255 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 DND1Q8IYX4 353 aaKnown RBP12.49□□□□□ -0.41
NFKB1-201ENST00000226574 FAM71E2Q8N5Q1 922 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF611Q8N823 705 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 DZANK1Q9NVP4 752 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 CD207Q9UJ71 328 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 MEIKINA0A087WXM9 373 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 A0A1W2PNR3 127 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SHISA8B8ZZ34 492 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 TO15178 435 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ADRB1P08588 477 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ADRA2AP08913 450 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 CTHP32929 405 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF85Q03923 595 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 FJX1Q86VR8 437 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 OR51E1Q8TCB6 317 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 IL1F10Q8WWZ1 152 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 MOGAT1Q96PD6 335 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
NFKB1-201ENST00000226574 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ANKRD10Q9NXR5 420 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 RHEBQ15382 184 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 C1orf140Q5VVS0 124 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SEZ6L2Q6UXD5 910 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 MDGA2Q7Z553 956 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 CA13Q8N1Q1 262 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
NFKB1-201ENST00000226574 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.49□□□□□ -0.41
NFKB1-201ENST00000226574 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
NFKB1-201ENST00000226574 ICOSLGO75144 302 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ANKRD34CP0C6C1 535 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 CISD3P0C7P0 127 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 POU3F2P20265 443 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 HRH1P35367 487 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 CLLU1Q5K131 121 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 TMPRSS11FQ6ZWK6 438 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ANKRD33Q7Z3H0 272 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 IL17RCQ8NAC3 791 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 BORCS8Q96FH0 119 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 C19orf43Q9BQ61 176 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 WWTR1Q9GZV5 400 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 B9D1Q9UPM9 204 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 TRAV36DV7A0A075B6V5 113 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 TRBV11-1A0A0K0K1C0 115 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 OR5K3A6NET4 321 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 OPRM1P35372 400 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF84P51523 738 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ETFDHQ16134 617 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ADGRE4PQ86SQ3 457 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ARIH2OSQ8N7S6 290 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 FGF21Q9NSA1 209 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF223Q9UK11 482 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ESPL1Q14674 2120 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 BET1O15155 118 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 SEMA7AO75326 666 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF674Q2M3X9 581 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 GLDNQ6ZMI3 551 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 TMEM217Q8N7C4 229 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 GLYATL2Q8WU03 294 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ASB17Q8WXJ9 295 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 KLHL13Q9P2N7 655 aa12.48□□□□□ -0.41
NFKB1-201ENST00000226574 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms