RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MSR1P21757 451 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 ISL1P61371 349 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 HSF2Q03933 536 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 MEP1BQ16820 701 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 TBRG1Q3YBR2 411 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 LINC01590Q5TEZ4 76 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 UGT2A3Q6UWM9 527 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 MEPCEQ7L2J0 689 aaKnown RBP14.34□□□□□ -0.11
LIM2-201ENST00000221973 ZNF627Q7L945 461 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 GID4Q8IVV7 300 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 SKA3Q8IX90 412 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 LRRC18Q8N456 261 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 ZNF511Q8NB15 262 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 SLC26A10Q8NG04 563 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 CNIH3Q8TBE1 160 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 C11orf40Q8WZ69 217 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 TEAD3Q99594 435 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 CLEC4MQ9H2X3 399 aaPredicted RBP14.34□□□□□ -0.11
LIM2-201ENST00000221973 SIAEQ9HAT2 523 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 CLN6Q9NWW5 311 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 RAB26Q9ULW5 256 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 MOKQ9UQ07 419 aa14.34□□□□□ -0.11
LIM2-201ENST00000221973 FLNAP21333 2647 aaKnown RBP14.33□□□□□ -0.11
LIM2-201ENST00000221973 FARS2O95363 451 aaKnown RBP14.33□□□□□ -0.12
LIM2-201ENST00000221973 TFP02787 698 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 GSTT1P30711 240 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 HOXC12P31275 282 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 FMO3P31513 532 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 CAPZA2P47755 286 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 CDH11P55287 796 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 TUBA1BP68363 451 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 TUBA4AP68366 448 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 TEKQ02763 1124 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 DAZAP2Q15038 168 aaPredicted RBP14.33□□□□□ -0.12
LIM2-201ENST00000221973 OCLNQ16625 522 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 SLC35D3Q5M8T2 416 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 LCN1P1Q5VSP4 162 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 MEDAGQ5VYS4 303 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 ALKBH2Q6NS38 261 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 TUBA1AQ71U36 451 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 THAP5Q7Z6K1 395 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 CDC20BQ86Y33 519 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 OR52N5Q8NH56 324 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 FAM222BQ8WU58 562 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 APH1BQ8WW43 257 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 SLC17A5Q9NRA2 495 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 MRPL22Q9NWU5 206 aaKnown RBP14.33□□□□□ -0.12
LIM2-201ENST00000221973 HSPE1-MOB4S4R3N1 261 aa14.33□□□□□ -0.12
LIM2-201ENST00000221973 OR5H1A6NKK0 313 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 SLC22A31A6NKX4 558 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 WBP4O75554 376 aaKnown RBP14.32□□□□□ -0.12
LIM2-201ENST00000221973 PATE4P0C8F1 98 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 ZNF823P16415 610 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 HTR1FP30939 366 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 PEX19P40855 299 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 BLVRAP53004 296 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 UBE2NP61088 152 aaKnown RBP14.32□□□□□ -0.12
LIM2-201ENST00000221973 NRN1LQ496H8 165 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 SLC25A30Q5SVS4 291 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 FAM27BQ5VT28 67 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 SLC16A14Q7RTX9 510 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 TGIF2LYQ8IUE0 185 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 ERI1Q8IV48 349 aaKnown RBP14.32□□□□□ -0.12
LIM2-201ENST00000221973 C17orf78Q8N4C9 275 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 WDR31Q8NA23 367 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 OR10H5Q8NGA6 315 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 FGFBP3Q8TAT2 258 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 RFKQ969G6 155 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 CNBD2Q96M20 576 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 Q96MT0 163 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 ANKRD60Q9BZ19 345 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 KCNN2Q9H2S1 579 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 WDR76Q9H967 626 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 PLEKHA6Q9Y2H5 1048 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 POLR1DQ9Y2S0 133 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 FREM1Q5H8C1 2179 aa14.32□□□□□ -0.12
LIM2-201ENST00000221973 SELENOFO60613 162 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 HLA-HP01893 362 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 MRPL3P09001 348 aaKnown RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 CD79AP11912 226 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 CD99P14209 185 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 MYF6P23409 242 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 NAA10P41227 235 aaPredicted RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 RPS27P42677 84 aaKnown RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 NUDT6P53370 316 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 ADAM8P78325 824 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 SORDQ00796 357 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 PIGFQ07326 219 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 CDK5R2Q13319 367 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 ENDOGQ14249 297 aaKnown RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 KCNMB1Q16558 191 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 SMN1Q16637 294 aaKnown RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 KRTAP21-3Q3LHN1 58 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 TIMM23BQ5SRD1 257 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 FBXO17Q96EF6 278 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 ZC3HAV1LQ96H79 300 aaKnown RBP14.31□□□□□ -0.12
LIM2-201ENST00000221973 POM121Q96HA1 1249 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 BOD1Q96IK1 185 aa14.31□□□□□ -0.12
LIM2-201ENST00000221973 WFIKKN1Q96NZ8 548 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms