RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KCNG2Q9UJ96 466 aa19.94■□□□□ 0.78
CCDC9-201ENST00000221922 ANKUB1A6NFN9 424 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 B8ZZF3 427 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 I3L521 148 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 ADAM10O14672 748 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 PDGFBP01127 241 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-201ENST00000221922 CXCL2P19875 107 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 KIR3DL2P43630 455 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 SUMO3P55854 103 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-201ENST00000221922 C17orf67Q0P5P2 114 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 CSRP2Q16527 193 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 AANATQ16613 207 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 SLC18B1Q6NT16 456 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 SLC36A1Q7Z2H8 476 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 GAREM1Q9H706 876 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 TAS2R8Q9NYW2 309 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 CIB4A0PJX0 185 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 VSTM2BA6NLU5 285 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 H0YC42 278 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 MFSD13AQ14CX5 517 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 RBMS2Q15434 407 aaKnown RBP19.93■□□□□ 0.78
CCDC9-201ENST00000221922 LRRC20Q8TCA0 184 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 ZNF587Q96SQ5 575 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-201ENST00000221922 KCNN3Q9UGI6 736 aa19.93■□□□□ 0.78
CCDC9-201ENST00000221922 A0A1W2PPL8 197 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 GGT3PA6NGU5 568 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 OR6C65A6NJZ3 312 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 PYCARD-AS1I3L0S3 204 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 WISP1O95388 367 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 ZNF250P15622 560 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 PCGF3Q3KNV8 242 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 DEFB123Q8N688 67 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 ZNF248Q8NDW4 579 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 AMELYQ99218 206 aa19.92■□□□□ 0.78
CCDC9-201ENST00000221922 IGLV1-36A0A0B4J1U3 117 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 SLC16A7O60669 478 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 CTAG2O75638 210 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 GPANK1O95872 356 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 CSF1P09603 554 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 VSIG10L2P0DP72 767 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 NFYAP23511 347 aaPredicted RBP19.91■□□□□ 0.78
CCDC9-201ENST00000221922 CRABP1P29762 137 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 RPS27P42677 84 aaKnown RBP19.91■□□□□ 0.78
CCDC9-201ENST00000221922 INSM1Q01101 510 aaPredicted RBP19.91■□□□□ 0.78
CCDC9-201ENST00000221922 SLC17A1Q14916 467 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 NHLRC3Q5JS37 347 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 ZNF679Q8IYX0 411 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 PCNPQ8WW12 178 aaKnown RBP19.91■□□□□ 0.78
CCDC9-201ENST00000221922 SFXN2Q96NB2 322 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 OR11A1Q9GZK7 315 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 ELOVL3Q9HB03 270 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 KIF25Q9UIL4 384 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 SLC22A23A1A5C7 686 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 LAMTOR5O43504 91 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 CFIP05156 583 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 WDR38Q5JTN6 314 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 KCTD18Q6PI47 426 aaPredicted RBP19.91■□□□□ 0.78
CCDC9-201ENST00000221922 OR4C16Q8NGL9 310 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 ELMOD3Q96FG2 381 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 ULBP3Q9BZM4 244 aa19.91■□□□□ 0.78
CCDC9-201ENST00000221922 A6NIZ1 184 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 MCRIP1C9JLW8 97 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 FTCDNL1E5RQL4 147 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 NAGAP17050 411 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 APOBEC1P41238 236 aaKnown RBP19.9■□□□□ 0.78
CCDC9-201ENST00000221922 EMP2P54851 167 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 FBXW4P57775 412 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 RAP1BP61224 184 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 RAP1AP62834 184 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ZXDAP98168 799 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 MEP1BQ16820 701 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 FAM198BQ6UWH4 519 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 LRRC69Q6ZNQ3 347 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 PPP1R3BQ86XI6 285 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ZNF454Q8N9F8 522 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 OR51D1Q8NGF3 324 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ALPK2Q86TB3 2170 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 TTLL8A6PVC2 850 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 L7N2F9 121 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 EFNB2P52799 333 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 DLX5P56178 289 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ROM1Q03395 351 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ZP4Q12836 540 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 OR5M10Q6IEU7 315 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 PAPD4Q6PIY7 484 aaKnown RBP19.9■□□□□ 0.78
CCDC9-201ENST00000221922 C3P1Q6ZMU1 363 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 OR8K3Q8NH51 312 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 RNF128Q8TEB7 428 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 WDR77Q9BQA1 342 aaPredicted RBP19.9■□□□□ 0.78
CCDC9-201ENST00000221922 MESP1Q9BRJ9 268 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 SLC26A1Q9H2B4 701 aa19.9■□□□□ 0.78
CCDC9-201ENST00000221922 ASCC3Q8N3C0 2202 aaKnown RBP19.89■□□□□ 0.77
CCDC9-201ENST00000221922 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 LOC105371267A0A1B0GV96 52 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 HRGP04196 525 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 SPARCP09486 303 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 CTLA4P16410 223 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 GLO1Q04760 184 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 BIVMQ86UB2 503 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 OR52B4Q8NGK2 314 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms