RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SLC35G3Q8N808 338 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 MORN4Q8NDC4 146 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 ZCCHC4Q9H5U6 513 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 F10P00742 488 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 NFYBP25208 207 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 LAP3P28838 519 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 PSMB3P49720 205 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.42
SF3A1-201ENST00000215793 PRTGQ2VWP7 1150 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 OR1M1Q8NGA1 313 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 OR10J5Q8NHC4 309 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 MARC2Q969Z3 335 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 BSCL2Q96G97 398 aaPredicted RBP12.4□□□□□ -0.42
SF3A1-201ENST00000215793 EMC6Q9BV81 110 aa12.4□□□□□ -0.42
SF3A1-201ENST00000215793 IGHV3-20A0A0C4DH32 117 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 ARRDC5A6NEK1 342 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 EIF4EP06730 217 aaKnown RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 GIPP09681 153 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 SMIM18P0DKX4 95 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 HIST1H1CP16403 213 aaKnown RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 M6PRP20645 277 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM99Q8N816 258 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 ANKRD10Q9NXR5 420 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 POLDIP2Q9Y2S7 368 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 H0Y8X5 98 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 PDGFAP04085 211 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 CSF3P09919 207 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 CCL11P51671 97 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 C6orf15Q6UXA7 325 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 OR10R2Q8NGX6 335 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 STT3BQ8TCJ2 826 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 HPSE2Q8WWQ2 592 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 SLAMF6Q96DU3 332 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 MBOAT4Q96T53 435 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 PHF7Q9BWX1 381 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 JAM3Q9BX67 310 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 GSX2Q9BZM3 304 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 GLAP06280 429 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 PCSK6P29122 969 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 DOC2BQ14184 412 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 TCTN3Q6NUS6 607 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 PRSS45Q7RTY3 260 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 H1FXQ92522 213 aaKnown RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 THOC3Q96J01 351 aaKnown RBP12.39□□□□□ -0.43
SF3A1-201ENST00000215793 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF355PQ9NSJ1 428 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 QPCTLQ9NXS2 382 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 HRH3Q9Y5N1 445 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 EDN3P14138 238 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 CD1EP15812 388 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF385BQ569K4 471 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 OR13C8Q8NGS7 320 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 CCDC74AQ96AQ1 378 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 POFUT1Q9H488 388 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 SLC25A19Q9HC21 320 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 SMCO4Q9NRQ5 59 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
SF3A1-201ENST00000215793 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 QDPRP09417 244 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PTAFRP25105 342 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 NPBWR1P48145 328 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 GSK3AP49840 483 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ADGRF3Q8IZF5 1079 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF439Q8NDP4 499 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 RBPMSQ93062 196 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PIGMQ9H3S5 423 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 BANF2Q9H503 90 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PTPRZ1P23471 2315 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 C5P01031 1676 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 RRP8O43159 456 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 EFSO43281 561 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 FCMRO60667 390 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 C1QBP02746 253 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 GRPP07492 148 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 LANCL2Q9NS86 450 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 TAS2R4Q9NYW5 299 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 SLCO1B1Q9Y6L6 691 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 SULT1C4O75897 302 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 TGM4P49221 684 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 EGR3Q06889 387 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 EDDM3AQ14507 147 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 CYHR1Q6ZMK1 362 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 CMTM2Q8TAZ6 248 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms