RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 RABL2AQ9UBK7 228 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 RABL2BQ9UNT1 228 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 V9GY05 133 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 TTLL8A6PVC2 850 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 ISG15P05161 165 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 RFPL3SP0C7P2 107 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 MMP16P51512 607 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 SUCLG1P53597 346 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 CLDN17P56750 224 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 MFGE8Q08431 387 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 IL18Q14116 193 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 P2RY14Q15391 338 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 C10orf128Q5T292 105 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 LRFN4Q6PJG9 635 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 IGF2-ASQ6U949 168 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 FOXL2NBQ6ZUU3 175 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 ESPNLQ6ZVH7 1005 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF554Q86TJ5 538 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 GGNQ86UU5 652 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 Q8N402 240 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 OR4M1Q8NGD0 313 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 ADGRG7Q96K78 797 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 PRRX2Q99811 253 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 C1orf198Q9H425 327 aa12.72□□□□□ -0.37
RTFDC1-201ENST00000023939 PINLYPA6NC86 204 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 PAHP00439 452 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 SPNP16150 400 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 ITGA3P26006 1051 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 NR4A2P43354 598 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 GABREP78334 506 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 CCBE1Q6UXH8 406 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 YRDCQ86U90 279 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 TMEM123Q8N131 208 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 IL22RA1Q8N6P7 574 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 OR2M7Q8NG81 312 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 OR10AC1Q8NH08 325 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 HTRA1Q92743 480 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 SFXN2Q96NB2 322 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 ETAA1Q9NY74 926 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 GLTPQ9NZD2 209 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
RTFDC1-201ENST00000023939 VPS13AQ96RL7 3174 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 TNFSF11O14788 317 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC43A1O75387 559 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 QDPRP09417 244 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 FREM3P0C091 2139 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 CALCBP10092 127 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 ADRA2CP18825 462 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 MAGEB1P43366 347 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 RFX2P48378 723 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SOX2P48431 317 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 PITPNBP48739 271 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 GFRA1P56159 465 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SOX8P57073 446 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SCAND1P57086 179 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 MFAP5Q13361 173 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 TOMM20Q15388 145 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SPINK14Q6IE38 97 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF704Q6ZNC4 412 aaPredicted RBP12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 LINC00346Q8IVM7 164 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 RDH10Q8IZV5 341 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 ZIC4Q8N9L1 334 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 PRSS33Q8NF86 280 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 TMEM106AQ96A25 262 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SLAMF6Q96DU3 332 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 UCN2Q96RP3 112 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SRXN1Q9BYN0 137 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC25A18Q9H1K4 315 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 NIPAL2Q9H841 368 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 BRD7Q9NPI1 651 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC22A13Q9Y226 551 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 PCDHGA9Q9Y5G4 932 aaKnown RBP12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.38
RTFDC1-201ENST00000023939 SPAARA0A1B0GVQ0 90 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 A0A1W2PPL8 197 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 NPIPA2E9PIF3 369 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 NPIPA3F8WFD2 350 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 SMAD9O15198 467 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 HPNP05981 417 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 H2BFMP0C1H6 154 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CD37P11049 281 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 SNRPBP14678 240 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 FSTP19883 344 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 ACHEP22303 614 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CSNK1A1P48729 337 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CLDN20P56880 219 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 CARD18P57730 90 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 LSM6P62312 80 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 OR1C1Q15619 314 aa12.7□□□□□ -0.38
RTFDC1-201ENST00000023939 HACD4Q5VWC8 232 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms