RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 GLIPR1L1Q6UWM5 242 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 ADGRE4PQ86SQ3 457 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 BPIFB2Q8N4F0 458 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 ST7LQ8TDW4 575 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 OIT3Q8WWZ8 545 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 SLC25A19Q9HC21 320 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 QPCTLQ9NXS2 382 aa9.39□□□□□ -0.91
NIPAL3-201ENST00000003912 A0A0G2JMP0 313 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CEBPZOSA8MTT3 80 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 IMPA2O14732 288 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GPR137BO60478 399 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SOD1P00441 154 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 PIPP12273 146 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 B4GALT1P15291 398 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF26P17031 533 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SHC1P29353 583 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ETV5P41161 510 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 HNRNPFP52597 415 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 IL13RA1P78552 427 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 EGR3Q06889 387 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 EDDM3AQ14507 147 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 HYAL4Q2M3T9 481 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 EIF2S3LQ2VIR3 472 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SFXN4Q6P4A7 337 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 FAM83FQ8NEG4 500 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 NOXO1Q8NFA2 376 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 OR4M2Q8NGB6 313 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GATA6Q92908 595 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 UPRTQ96BW1 309 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ARHGDIGQ99819 225 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TMEM43Q9BTV4 400 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 HINT3Q9NQE9 182 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 H7C2Y5 167 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TOXO94900 526 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 IFNA17P01571 189 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GP1BAP07359 652 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ETV6P41212 452 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CEACAM16Q2WEN9 425 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GLYATL3Q5SZD4 288 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 RGS7BPQ6MZT1 257 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 USP51Q70EK9 711 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TMEM185AQ8NFB2 350 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ZFAND2BQ8WV99 257 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 OPA3Q9H6K4 179 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GPR173Q9NS66 373 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 LOC100289279A0A1B0GTE1 492 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 LOC107986453A0A1B0GWG9 222 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TRDV1A0A1B0GX56 115 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TMEM129A0AVI4 362 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 M0R036 132 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 PAHP00439 452 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GABRA1P14867 456 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TIGD3Q6B0B8 471 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ANKRD16Q6P6B7 361 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF573Q86YE8 665 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 DMBX1Q8NFW5 382 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 OR51E1Q8TCB6 317 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ARSGQ96EG1 525 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF285Q96NJ3 590 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 TXNL4BQ9NX01 149 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 COL11A1P12107 1806 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CLDN12P56749 244 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CORO6Q6QEF8 472 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 AMER3Q8N944 861 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 LGALS14Q8TCE9 139 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SLCO5A1Q9H2Y9 848 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 WDR54Q9H977 334 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 KCNE3Q9Y6H6 103 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 A8MV72 311 aaPredicted RBP9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 E9PI62 339 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GFRA3O60609 400 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 NCR1O76036 304 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 OR8U9P0C7N5 309 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 FTH1P19P0C7X4 201 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CD53P19397 219 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 SRMP19623 302 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 GALNSP34059 522 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 NHSL2Q5HYW2 709 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ACSM5Q6NUN0 579 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 ANGPTL5Q86XS5 388 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 RIMKLAQ8IXN7 391 aa9.38□□□□□ -0.91
NIPAL3-201ENST00000003912 CLDN22Q8N7P3 220 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms