RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vmn1r139E9Q8L6 297 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfp760E9QAF5 666 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cyp4a31F8WGU9 509 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r112G3UY48 297 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Gm8229K7N749 213 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r135K9J7G0 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r125L7N227 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r116L7N2A6 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc12a3P59158 1002 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 HgfQ08048 728 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Alg11Q3TZM9 492 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Rnf166Q3U9F6 237 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 HepacamQ640R3 418 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Il11ra1Q64385 432 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cyb561a3Q6P1H1 242 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Adprhl1Q8BGK2 353 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r100Q9EPS5 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Sdccag3A2AIW0 432 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Skint10A7TZG1 354 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Smad5P97454 465 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 MestQ07646 335 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mier2Q3U3N0 541 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cpeb3Q7TN99 716 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Pcyt1bQ811Q9 369 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfp9Q8BIS1 454 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Scmh1Q8K214 706 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr99Q8VFE4 305 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1389Q8VGX0 311 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Nxt1Q9QZV9 140 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ints1Q6P4S8 2195 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Espl1P60330 2118 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 P01661 131 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 P01662 111 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 P01663 111 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cd79aP11911 220 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Nxpe2Q3U095 558 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Crtc2Q3U182 692 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Foxr2Q3UM89 302 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr884Q7TRE1 309 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mfsd8Q8BH31 519 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 NdnfQ8C119 568 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Rnf121Q8R1Z9 327 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr788Q8VFI0 311 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Znf24Q91VN1 368 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc41a3Q921R8 488 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Klf7Q99JB0 301 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Bcl2l14Q9CPT0 328 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Exosc5Q9CRA8 235 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tspan32Q9JHH2 256 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Dusp13Q9QYJ7 198 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zfp989H3BLB0 661 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Anxa2P07356 339 aaKnown RBP14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 S100a6P14069 89 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 BpiQ67E05 483 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ino80cQ8BHA0 191 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1484Q8VEU6 315 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr828Q8VFM8 312 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tmem123Q91Z22 195 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Hrh4Q91ZY2 391 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ddx28Q9CWT6 540 aaKnown RBP14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Nek6Q9ES70 313 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Alyref2Q9JJW6 218 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cxcl15Q9WVL7 167 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 VcanQ62059 3357 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Igkv9-124A0A0G2JDR3 117 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ntn1O09118 604 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Fcn1O70165 334 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Ighg1P01869 393 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 CdaP56389 146 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Acta2P62737 377 aaKnown RBP14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Actg2P63268 376 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mrgprb2Q3KNA1 338 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cdk10Q3UMM4 360 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Dhrs13Q5SS80 376 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc35f2Q7TML3 375 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Yipf6Q8BR70 236 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Klhl12Q8BZM0 568 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Lsm10Q8QZX5 122 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr444Q8VFS6 310 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Arpc5lQ9D898 153 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Med11Q9D8C6 117 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Wdr61Q9ERF3 305 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 Uchl1Q9R0P9 223 aa14.32□□□□□ -0.12
Trim39-203ENSMUST00000113706 LexmA2AVQ5 414 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 B3galt1O54904 326 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Sox18P43680 377 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Cass4Q08EC4 804 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Dpp10Q6NXK7 797 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr714Q7TRN0 317 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Slc30a8Q8BGG0 367 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Flywch1Q8CI03 673 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Myl9Q9CQ19 172 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Tlr1Q9EPQ1 795 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Mrap2D3Z1Q2 207 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Serpine2Q07235 397 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Agbl5Q09M02 886 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Zrsr1Q64707 428 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 DraxinQ6PAL1 343 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Olfr1463Q7TQR3 310 aa14.31□□□□□ -0.12
Trim39-203ENSMUST00000113706 Psmf1Q8BHL8 271 aa14.31□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms