RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 H2-T10F6T1I5 379 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Tmigd3G3X8R9 209 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gdf5P43027 495 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Fbxo34Q80XI1 695 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Ubtd1Q91WB7 227 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Insl5Q9WUG6 135 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gnb4P29387 340 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Doc2bP70169 412 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Il10rbQ61190 349 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Sidt1Q6AXF6 827 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Igsf5Q7TSN7 370 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Bpifb2Q8C1E1 462 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Cldn7Q9Z261 211 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Hsd17b14E9Q3D4 273 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gm3512L7N206 146 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Tas2r107Q7M725 308 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Zbtb42Q811H0 420 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Sfxn1Q99JR1 322 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 CenpmQ9CQA0 180 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Bex4Q9CWT2 118 aa17.17■□□□□ 0.34
Trim71-201ENSMUST00000111816 Duox1A2AQ92 1551 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gm6760Q0ZNK3 87 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Try10Q792Z1 246 aaKnown RBP17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Pycr1Q922W5 309 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Vmn1r44Q9EQ47 310 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 ShprhQ7TPQ3 1674 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Pwwp2bE9Q9M8 600 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Hoxd9P28357 339 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Ctdsp1P58466 261 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Csnk1a1Q8BK63 337 aaKnown RBP17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr1462Q8VFW3 307 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mrps24Q9CQV5 167 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr1076A2AK60 313 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr237-ps1K9J725 310 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Phlda2O08969 144 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Bmp8aP34821 399 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Bmp8bP55105 399 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr729Q8VET4 323 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr1250Q8VGM3 314 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Q9CRW3 126 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Barx1Q9ER42 254 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 AllcQ9JHX6 414 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gm5093E9PZB3 174 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 CckarO08786 436 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Cntnap5bQ0V8T8 1292 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Slc22a5Q9Z0E8 557 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr173E9QAT7 321 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Cldn34aG3UW52 211 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 EporP14753 507 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Lim2P56563 173 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Rnf180Q3U827 592 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr657Q7TRP7 319 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mmp28Q8CGV8 520 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Rnf208Q8K0W3 265 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr868Q8VFI8 309 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Syt17Q920M7 470 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Oosp1Q925U0 202 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Maf1Q9D0U6 258 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Lrrc3cA0A1B0GRI5 255 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr1006A2ALD2 312 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr319L7MTY4 306 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Ppp1r26Q6A025 1163 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Rab28Q99KL7 221 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Samd8Q9DA37 478 aa17.16■□□□□ 0.34
Trim71-201ENSMUST00000111816 Cd93O89103 644 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 InhbbQ04999 411 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Kir3dl2Q673W2 388 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Vmn1r19Q8R2C7 308 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Prl5a1Q9JII2 230 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Scamp5Q9JKD3 235 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Polr2aP08775 1970 aaKnown RBP17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Rhox7aA2A4F1 281 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Vmn1r67G5E8C1 305 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Atp1b1P14094 304 aaKnown RBP17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Csf3rP40223 837 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Ranbp9P69566 653 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Defa20Q45VN2 95 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mblac2Q8BL86 279 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mtmr14Q8VEL2 648 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Abhd1Q9QZC8 412 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mbtps1Q9WTZ2 1052 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 4930402K13RikB1AW18 415 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Nat8f7E0CYR6 227 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gm10801F7C7Q0 168 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Vmn1r195Q5SVD6 316 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Dvl3Q61062 716 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Pgr15lQ80T54 456 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Zfyve21Q8VCM3 234 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Olfr979Q8VH10 311 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Mrps17Q9CQE3 120 aaKnown RBP17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Folr1P35846 255 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 SnnP61807 88 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Bud31Q6PGH1 103 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gas2l1Q8JZP9 678 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Gjc3Q921C1 269 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Slc29a3Q99P65 475 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Tmem175Q9CXY1 499 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Fam3aQ9D8T0 230 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 St6galnac5Q9QYJ1 336 aa17.15■□□□□ 0.34
Trim71-201ENSMUST00000111816 Decr2Q9WV68 292 aa17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms