RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cdk2ap1O35207 114 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ighg1P01869 393 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Limk1P53668 647 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cnn2Q08093 305 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Camk2dQ6PHZ2 499 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fbxl14Q8BID8 400 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdcp2Q8BQH6 427 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 AntxrlQ8BVM2 641 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Frmd6Q8C0V9 622 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdc123Q8CII2 336 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1043Q8VFK4 314 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr214Q8VG27 320 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1351Q8VGU6 319 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pole4Q9CQ36 118 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tspan31Q9CQ88 210 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sorcs2Q9EPR5 1159 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Scamp2Q9ERN0 329 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Trbv20A0A0B4J1H5 111 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm2022A0A1Y7VLT7 144 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cd101A8E0Y8 1033 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mn1D3YWE6 1297 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Wdfy1E9Q4P1 410 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm3636E9Q5P1 227 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm17555F6U8B9 371 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fbxw25F7C9P2 466 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm2075J3QMW5 144 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 AlyrefO08583 255 aaKnown RBP7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Eif1P48024 113 aaKnown RBP7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rpl27P61358 136 aaKnown RBP7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nfatc3P97305 1075 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdk10Q3UMM4 360 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 BB287469Q3UT53 144 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lrrn1Q61809 716 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Il11ra1Q64385 432 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zfp975Q6NVD6 525 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Npr2Q6VVW5 1047 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1282Q7TQY5 305 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1222Q7TR02 311 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pgm2Q7TSV4 620 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 SelenoiQ80TA1 398 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 TiprlQ8BH58 271 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Eif1axQ8BMJ3 144 aaKnown RBP7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Crispld2Q8BZQ2 495 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nhlrc2Q8BZW8 725 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 IrgcQ8C262 412 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fmo4Q8VHG0 560 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 SostQ99P68 211 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Smurf1Q9CUN6 731 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ddx28Q9CWT6 540 aaKnown RBP7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 FtmtQ9D5H4 237 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zfp383A0A087WRR7 490 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zar1lC3VD30 291 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr547E9PXN3 311 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 PtprhE9Q0N2 971 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Erp29P57759 262 aaKnown RBP7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 SgcdP82347 289 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr11Q60890 313 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 NppcQ61839 126 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc6a7Q6PGE7 637 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gper1Q8BMP4 375 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fbxw19Q8C2W8 466 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Teddm1bQ8CC62 306 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pafah2Q8VDG7 390 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Calhm2Q8VEC4 323 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1417Q8VGJ6 315 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem123Q91Z22 195 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sesn3Q9CYP7 492 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zfp84Q9D654 559 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ptges3lQ9D9A7 131 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fgf20Q9ESL9 211 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Serinc1Q9QZI8 453 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gpc6Q9R087 555 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ch25hQ9Z0F5 298 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 PrnA0A075B668 197 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr228A0A1L1SR98 313 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr115B2RTB9 312 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lsm2O35900 95 aaKnown RBP7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cops3O88543 423 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 P01680 129 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rps25P62852 125 aaKnown RBP7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cass4Q08EC4 804 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Taf6Q62311 678 aaKnown RBP7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Hist2h2abQ64522 130 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Chrdl2Q8VEA6 426 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1143Q8VEU8 314 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1387Q8VFA9 311 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr821Q8VG45 310 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr56Q8VGD6 315 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 EsamQ925F2 394 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 CsQ9CZU6 464 aaKnown RBP7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 PrndQ9QUG3 179 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Prok2Q9QXU7 128 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Trav10nA0A075B622 114 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Trav10A0A075B642 114 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Btbd35f16A0A087WSN2 498 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Igkv4-63A0A0G2JFU6 117 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lao1B1ARV3 523 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r137D3YTY1 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r143E9PUW9 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r157E9Q069 297 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms