RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rpl27P61358 136 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mfsd2bQ3T9M1 494 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Jmjd8Q3TA59 316 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Krba1Q6NXZ1 1043 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cdh24Q6PFX6 781 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Scml4Q80VG1 408 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sf3b4Q8QZY9 424 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cep41Q99NF3 373 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Spaca7Q9D2S4 182 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr716Q9EPG6 314 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 2610044O15Rik8A0A087WRJ1 410 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm14418A2ARR6 358 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm14322A2AW66 358 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tmem215A7E1Z1 235 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fbxw28E9Q8A4 466 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 4933403O08RikF6UK53 379 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Il10P18893 178 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Defa11P50709 85 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pebp1P70296 187 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fxyd2Q04646 70 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Q504N7 393 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cnrip1Q5M8N0 164 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ifna15Q61718 190 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Iglon5Q8HW98 336 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1512Q8VF72 313 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pop4Q9CR08 221 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cln8Q9QUK3 288 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 SpdefQ9WTP3 325 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hey1Q9WV93 299 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ndufaf5A2APY7 343 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1107A2AVB8 312 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Kcns2O35174 477 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 EhfO70273 300 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fcgr3P08508 261 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tacr1P30548 407 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pou3f2P31360 445 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rab22aP35285 194 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sox18P43680 377 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Agbl5Q09M02 886 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm2aQ60648 193 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp429Q7M6Y0 485 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ZxdcQ8C8V1 858 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tubg2Q8VCK3 451 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1163Q8VFR4 316 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc22a26Q91WJ2 552 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 RTRAFQ9CQE8 244 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 PacrgQ9DAK2 241 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 HgfacQ9R098 653 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fhl5Q9WTX7 284 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zswim8Q3UHH1 1832 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp345A2AQA1 561 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Htra4A2RT60 483 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm12790B1AUV6 201 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 HpnO35453 436 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fpr1P33766 364 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 GipP48756 144 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fabp5Q05816 135 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zfp987Q32P14 633 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 D17Wsu92eQ3TT38 291 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Entpd6Q3U0P5 455 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm5113Q3UGK8 141 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr12Q60894 333 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ArhgdigQ62160 225 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Znf728Q6P5C7 752 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 B430306N03RikQ6QX36 289 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr591Q7TRR7 314 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr201Q7TS38 308 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc26a11Q80ZD3 593 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc38a9Q8BGD6 560 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trib3Q8K4K2 354 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tm4sf5Q91XF2 196 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr116Q923Q6 321 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 OxsmQ9D404 459 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 OcstampQ9D611 498 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Rnf32Q9JIT1 368 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gab1Q9QYY0 695 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Clec4eQ9R0Q8 214 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Adamdec1Q9R0X2 467 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Decr2Q9WV68 292 aa9.47□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm16368A0A1Y7VNG9 144 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr430E9Q5F1 317 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Socs1O35716 212 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gpld1O70362 837 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 VegfdP97946 358 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nxt2Q3UNA4 142 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ptpn21Q62136 1176 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Galnt2Q6PB93 570 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pgr15lQ80T54 456 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr291Q8VF60 317 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Dyrk3Q922Y0 586 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 TMEM121BQ99MX7 572 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trappc6bQ9D289 158 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Plpp6Q9D4F2 292 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trappc4Q9ES56 219 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pkmyt1Q9ESG9 490 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Bex2Q9WTZ8 129 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ighv15-2A0A0A6YX72 118 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sirpb1bA0A0A6YXN8 397 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Adam34A2RSG8 714 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Esp34G3UXG0 151 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms