RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 TifaQ793I8 184 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ap1s3Q7TN05 154 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr314Q7TRZ7 330 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cacul1Q8R0X2 377 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr648Q8VG19 316 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dapl1Q9D757 107 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Actr6Q9D864 396 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 C1qtnf2Q9D8U4 294 aa14.79□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1432A0A140LHS7 346 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1109A2AT96 312 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eef1a1P10126 462 aaKnown RBP14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Il1r1P13504 576 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 AhrP30561 848 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 GdnfP48540 211 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 D17Wsu92eQ3TT38 291 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmem231Q3U284 315 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rxfp3Q8BGE9 472 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc30a8Q8BGG0 367 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cdk5rap1Q8BTW8 588 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ctxn1Q8K129 82 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ccdc115Q8VE99 180 aaKnown RBP14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr780Q8VEU0 312 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dbf4Q9QZ41 663 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm11214V9GX06 183 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 EomesO54839 707 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tra2bP62996 288 aaKnown RBP14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 BglapP86546 95 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bglap2P86547 95 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc38a8Q5HZH7 432 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ctf1Q60753 203 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Sidt1Q6AXF6 827 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Shc4Q6S5L9 626 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Kansl1Q80TG1 1036 aaKnown RBP14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Znf775Q8BI73 538 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmem222Q8BVA2 208 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fam199xQ8K2D0 388 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Isyna1Q9JHU9 557 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 C1galt1Q9JJ06 363 aa14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tet2Q4JK59 1912 aaKnown RBP14.78□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pom121l12A0A1B0GSJ4 278 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1156A2AVC3 323 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Btbd8D3YUB6 377 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Wdr25E9Q349 535 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 4933403O08RikF6UK53 379 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Zfp870J3QMA4 560 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 DxoO70348 397 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 P01629 112 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pcsk4P29121 655 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rps11P62281 158 aaKnown RBP14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Nudt18Q3U2V3 323 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1500Q7TQQ3 311 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bpifb3Q80ZU7 473 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gpr137Q80ZU9 396 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Comtd1Q8BIG7 262 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rft1Q8C3B8 541 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lrrtm1Q8K377 522 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tm6sf2Q8R1J1 378 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1143Q8VEU8 314 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Thumpd1Q99J36 350 aaKnown RBP14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 A0A1L1STL9 112 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Vmn2r49D3Z6L3 852 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bpifa2P07743 235 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Klhdc2Q4G5Y1 406 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fzd7Q61090 572 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Prss34Q80UR4 318 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 CdnfQ8CC36 187 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc16a13Q8CE94 428 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eipr1Q8K0G5 386 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1110Q8VG38 312 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gtpbp3Q923K4 492 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Stoml2Q99JB2 353 aaKnown RBP14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tada1Q99LM9 335 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Thbs4Q9Z1T2 963 aa14.77□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm8159E9Q0R1 267 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Grcc10O35127 126 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Wnt2bO70283 389 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Igsf6P0C6B7 237 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Slc2a1P17809 492 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Camk2bP28652 542 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 RetP35546 1115 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 UradQ283N4 178 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 HeltQ7TS99 240 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Muc20Q8BUE7 656 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tmprss11gQ8BZ10 417 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Aimp2Q8R010 320 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 ApehQ8R146 732 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Mrgpra3Q91WW3 302 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Dmac2Q9D7K5 258 aaKnown RBP14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tex33Q9D9J2 266 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gab1Q9QYY0 695 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Dmrt1Q9QZ59 374 aa14.77□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ndufaf6A2AIL4 333 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1224-ps1A3KGY4 311 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Saxo1B1AXP3 476 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Zfp712E9PXJ4 705 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Alx4O35137 399 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Hsd17b12O70503 312 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Fgf11P70378 225 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Agbl4Q09LZ8 540 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Adam9Q61072 845 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms