RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Aqp3Q8R2N1 292 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr47Q8VF18 321 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr648Q8VG19 316 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr763Q8VGC1 309 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem63aQ91YT8 804 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Cdca5Q9CPY3 264 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Coq5Q9CXI0 327 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Dapl1Q9D757 107 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Yipf7Q9JIM5 254 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Dok3Q9QZK7 444 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm34653A0A1L1SR01 368 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Trabd2bB1ATG9 517 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 4930595D18RikD3Z642 64 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Hsd17b12O70503 312 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 RradO88667 308 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Hoxd12P23812 268 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Bdkrb2P32299 392 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Mier2Q3U3N0 541 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Tnfrsf8Q60846 498 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Cd55Q61475 390 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr314Q7TRZ7 330 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Prss34Q80UR4 318 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Lin28aQ8K3Y3 209 aaKnown RBP14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr820Q8VFU5 312 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Scamp2Q9ERN0 329 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Qtrt1Q9JMA2 403 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Avpr1bQ9WU02 421 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Oc90Q9Z0L3 485 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Igkv9-123A0A140T8N8 117 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Ankrd60A2AMD2 318 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1109A2AT96 312 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Rhox1B1APN4 224 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm45711E0CXA2 391 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn2r34E9PVI0 852 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn2r37F8VQD3 802 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Oosp3G5E8D7 195 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn1r170K7N6W9 304 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn2r45L7N2B5 852 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn2r29L7N2D4 852 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 NfyaP23708 346 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Uck1P52623 277 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 GifP52787 417 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 CtdsplP58465 276 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Tas2r113Q7M711 309 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1058Q7TR74 316 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 LipkQ8BM14 398 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Akr1c18Q8K023 323 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Babam2Q8K3W0 383 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 MthfrQ9WU20 654 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Pcsk5Q04592 1877 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr727A2RTN7 324 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem182B2RVY9 229 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Prdm13E9PZZ1 754 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Prkar1bP12849 381 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Gpd1P13707 349 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 GdnfP48540 211 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 S100a1P56565 94 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Rce1P57791 329 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Tas2r123P59528 333 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Cd34Q64314 382 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr17Q7TRM9 315 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc22a20Q80UJ1 556 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 C1sbQ8CFG8 688 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Tm6sf2Q8R1J1 378 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr870Q8VGG4 311 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Ripply3Q924S9 152 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem51Q99LG1 249 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Mrps16Q9CPX7 135 aaKnown RBP14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 PinlypQ9CQD7 212 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Otub2Q9CQX0 234 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Rita1Q9D1H0 253 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Ptdss2Q9Z1X2 473 aa14.92□□□□□ -0.02
Shh-201ENSMUST00000002708 Piezo2Q8CD54 2822 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Btbd35f23A0A0R4J2B9 498 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm28710A0A1B0GR31 962 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 A0A286YCH8 300 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 3110040M04RikA0A286YDK0 300 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 A0A286YE43 300 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Pramef6A2A8M8 474 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Btbd8D3YUB6 377 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Prr23a2D3YWX5 253 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Spi1P17433 272 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Rag2P21784 527 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Hoxa10P31310 416 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Hsd11b1P50172 292 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Six5P70178 719 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr151Q60893 309 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1222Q7TR02 311 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1106Q7TR57 312 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Prps1l1Q8C5R8 318 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Fbxo4Q8CHQ0 385 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 P2rx2Q8K3P1 485 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Masp2Q91WP0 685 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Mgat2Q921V5 442 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Kti12Q9D1R2 351 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Cers4Q9D6J1 393 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Gstk1Q9DCM2 226 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm11214V9GX06 183 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 MyofQ69ZN7 2048 aaKnown RBP14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Ighv1-24A0A0A6YY24 117 aa14.91□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms