RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PIGQQ9BRB3 760 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 PPP1R3EQ9H7J1 279 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 RPRD1BQ9NQG5 326 aaKnown RBP9.16□□□□□ -0.94
PHGDH-224ENST00000641711 POLE4Q9NR33 117 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 INIPQ9NRY2 104 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 VSX1Q9NZR4 365 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-224ENST00000641711 ZNF346Q9UL40 294 aaKnown RBP9.16□□□□□ -0.94
PHGDH-224ENST00000641711 NPIPA1Q9UND3 350 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 COPS3Q9UNS2 423 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 ZNF835Q9Y2P0 537 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 FKBP7Q9Y680 259 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 MPDZO75970 2070 aa9.16□□□□□ -0.94
PHGDH-224ENST00000641711 LRRK2Q5S007 2527 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 ARHGAP21Q5T5U3 1957 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 ARPC4-TTLL3A0A0A6YYG9 625 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 A0A0G2JK05 382 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 NPIPB13A6NJU9 1138 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 C17orf51A8MQB3 221 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 NPIPB4C9JG80 1138 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 FTCDNL1E5RQL4 147 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 PLPP3O14495 311 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 ZNF208O43345 1280 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 SLC19A2O60779 497 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 TMEM127O75204 238 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 AHSA1O95433 338 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 F13BP05160 661 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 HNRNPCP07910 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 IL7P13232 177 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 FKBP2P26885 142 aaKnown RBP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 SHC1P29353 583 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 RFC3P40938 356 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 EVX1P49640 407 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 GDI2P50395 445 aaKnown RBP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 BLVRAP53004 296 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 HCCSP53701 268 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 CASP6P55212 293 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 CAV3P56539 151 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 RPL27P61353 136 aaKnown RBP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 BCL2A1Q16548 175 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 MYO7BQ6PIF6 2116 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 FAM131AQ6UXB0 335 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 CDC20BQ86Y33 519 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 CADM3Q8N126 398 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 OR6V1Q8N148 313 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 GTPBP8Q8N3Z3 284 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 SCAIQ8N9R8 606 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 OR14L1PQ8NHC6 308 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 MFSD8Q8NHS3 518 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 CHAC2Q8WUX2 184 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 MRGPRX4Q96LA9 322 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 POTEKPQ9BYX7 375 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 PPIL3Q9H2H8 161 aaKnown RBP9.15□□□□□ -0.94
PHGDH-224ENST00000641711 TXNIPQ9H3M7 391 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 ZCCHC4Q9H5U6 513 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 LDAHQ9H6V9 325 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 FBXL2Q9UKC9 423 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 TBC1D24Q9ULP9 559 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 GRIP1Q9Y3R0 1128 aa9.15□□□□□ -0.94
PHGDH-224ENST00000641711 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 FIGNL2A6NMB9 653 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 J3QKU1 62 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 DCTN6O00399 190 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 DVL2O14641 736 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 PRRG2O14669 202 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 PHYHO14832 338 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 WDR1O75083 606 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 TRAPPC6AO75865 159 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ARL6IP5O75915 188 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 WISP1O95388 367 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ABHD16AO95870 558 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 HLA-DQB1P01920 261 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 TACSTD2P09758 323 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 UCHL1P09936 223 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 GABRA1P14867 456 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ABOP16442 354 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 GRPRP30550 384 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 PTGS2P35354 604 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 THBS2P35442 1172 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ACVR1BP36896 505 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 RANBP1P43487 201 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 GFRA1P56159 465 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
PHGDH-224ENST00000641711 EGR3Q06889 387 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 SCN1BQ07699 218 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ASAH1Q13510 395 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 TOMM20Q15388 145 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 BAK1Q16611 211 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 PLPPR5Q32ZL2 321 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ZMAT1Q5H9K5 638 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 MTFR2Q6P444 385 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 CNIH2Q6PI25 160 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 CCBE1Q6UXH8 406 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-224ENST00000641711 RPTNQ6XPR3 784 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 OR8H2Q8N162 312 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 ZNF511Q8NB15 262 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 FAM57AQ8TBR7 257 aa9.14□□□□□ -0.95
PHGDH-224ENST00000641711 SLC25A43Q8WUT9 341 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-224ENST00000641711 RNF166Q96A37 237 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms