RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TNFRSF1BP20333 461 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 CBLP22681 906 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 EPHA2P29317 976 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 S100A5P33763 92 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 SOX6P35712 828 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
HLA-C-210ENST00000640219 CARTPTQ16568 116 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 ZNF404Q494X3 552 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 MEDAGQ5VYS4 303 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 TMPPEQ6ZT21 453 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 TSEN54Q7Z6J9 526 aaKnown RBP11.98□□□□□ -0.49
HLA-C-210ENST00000640219 AQP11Q8NBQ7 271 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 TMEM234Q8WY98 164 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 UBE2FQ969M7 185 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 FOXN4Q96NZ1 517 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 MROQ9BYG7 248 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 HHATLQ9HCP6 504 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
HLA-C-210ENST00000640219 A0A0G2JPF8 293 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 FUOMA2VDF0 154 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 GJE1A6NN92 205 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 HNRNPCL2B2RXH8 293 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 HNRNPCL3B7ZW38 293 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 LYZL6O75951 148 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 HNRNPCL4P0DMR1 293 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 OSMP13725 252 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 HTR2AP28223 471 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CD40LGP29965 261 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 NTF4P34130 210 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 APOBEC1P41238 236 aaKnown RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 LIMS1P48059 325 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 GSSP48637 474 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 PPP5CP53041 499 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 OR2B6P58173 313 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 RAC3P60763 192 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 NCS1P62166 190 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 RASGEF1BQ0VAM2 473 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 ST3GAL4Q11206 333 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 PTGES3Q15185 160 aaKnown RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 ZNF544Q6NX49 715 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 TMEM108Q6UXF1 575 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CASP12Q6UXS9 341 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 B3GLCTQ6Y288 498 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 SSX8Q7RTT4 187 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 SLC46A3Q7Z3Q1 461 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CMIPQ8IY22 773 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 BBS10Q8TAM1 723 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 NIPSNAP1Q9BPW8 284 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 NMNAT1Q9HAN9 279 aaPredicted RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 SERINC1Q9NRX5 453 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CHCHD3Q9NX63 227 aaKnown RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CCDC59Q9P031 241 aaKnown RBP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-C-210ENST00000640219 SLC9A8Q9Y2E8 581 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 ZNF281Q9Y2X9 895 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 CORINQ9Y5Q5 1042 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 FKBP7Q9Y680 259 aa11.97□□□□□ -0.49
HLA-C-210ENST00000640219 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 LOC390937A0A1W2PQ73 354 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ISPDA4D126 451 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ZAR1LA6NP61 321 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 TMPRSS2O15393 492 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 PIPP12273 146 aaPredicted RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 POU1F1P28069 291 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 IFNA8P32881 189 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 TGFBR2P37173 567 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 SLC1A3P43003 542 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 SNRPGP62308 76 aaKnown RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 SPOCK1Q08629 439 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 COX10Q12887 443 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 LARS2Q15031 903 aaKnown RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 RNPS1Q15287 305 aaKnown RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 MIDNQ504T8 468 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ARMCX4Q5H9R4 360 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 TIMM23BQ5SRD1 257 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ABLIM2Q6H8Q1 611 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 Q6ZT83 130 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 OR9Q2Q8NGE9 314 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 OR9Q1Q8NGQ5 310 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 FAM216AQ8WUB2 273 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 ITPKCQ96DU7 683 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 BCL2L10Q9HD36 194 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 TIGARQ9NQ88 270 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 CALML5Q9NZT1 146 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 SEC14L4Q9UDX3 406 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 SLC13A4Q9UKG4 626 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 RPL36Q9Y3U8 105 aaKnown RBP11.96□□□□□ -0.49
HLA-C-210ENST00000640219 PEX16Q9Y5Y5 336 aa11.96□□□□□ -0.49
HLA-C-210ENST00000640219 IRGMA1A4Y4 181 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 SNTNA6NMZ2 147 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 J3KTA2 159 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 M0R3H8 397 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 OR10H3O60404 316 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 TPST2O60704 377 aa11.95□□□□□ -0.5
HLA-C-210ENST00000640219 CYTIPO60759 359 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms