RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 COA6Q5JTJ3 125 aaKnown RBP2.23□□□□□ -2.05
CCDC7-216ENST00000640058 ARMC12Q5T9G4 340 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 METAP1DQ6UB28 335 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-216ENST00000640058 ASCL5Q7RTU5 278 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 CNPY4Q8N129 248 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 OR7G2Q8NG99 324 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 OR1S2Q8NGQ3 325 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 CD300LFQ8TDQ1 290 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 ELMO1Q92556 727 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 STMN2Q93045 179 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 SGK3Q96BR1 496 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 WFIKKN1Q96NZ8 548 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 FOXC2Q99958 501 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 OSBPL10Q9BXB5 764 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 SHPKQ9UHJ6 478 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 CABIN1Q9Y6J0 2220 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
CCDC7-216ENST00000640058 CIB2O75838 187 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CLPXO76031 633 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 SRP72O76094 671 aaKnown RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 TCN2P20062 427 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 SLC2A5P22732 501 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 AQP2P41181 271 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 TNNT2P45379 298 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CCNHP51946 323 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 NCBP2P52298 156 aaKnown RBP eCLIP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 ACLYP53396 1101 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 SRSF5Q13243 272 aaKnown RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 LRRC66Q68CR7 880 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CERS6Q6ZMG9 384 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 UBALD2Q8IYN6 164 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 PDIK1LQ8N165 341 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 GTPBP8Q8N3Z3 284 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 STPG2Q8N412 459 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CEP112Q8N8E3 955 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 FBXL13Q8NEE6 735 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 OR10R2Q8NGX6 335 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 SDR42E1Q8WUS8 393 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 MED8Q96G25 268 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 PDXPQ96GD0 296 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 OR2A5Q96R48 311 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 PLA2G12AQ9BZM1 189 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CTNNA3Q9UI47 895 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 LSM7Q9UK45 103 aaKnown RBP2.22□□□□□ -2.05
CCDC7-216ENST00000640058 CEMIPQ8WUJ3 1361 aa2.22□□□□□ -2.05
CCDC7-216ENST00000640058 H3BNH8 94 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 XKRYO14609 159 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 CHST1O43916 411 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 EEDO75530 441 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 VAMP5O95183 116 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 MPZL1O95297 269 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 UTS2O95399 124 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 KRT14P02533 472 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 FGGP02679 453 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 PABPC4LP0CB38 370 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 TROVE2P10155 538 aaKnown RBP eCLIP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 PSMC3P17980 439 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 TNNI1P19237 187 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 CHMLP26374 656 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 SERPINB5P36952 375 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 RORCP51449 518 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 CDH6P55285 790 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 RPS21P63220 83 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 PPP1R7Q15435 360 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 TTLL9Q3SXZ7 439 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 ZBED5Q49AG3 693 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 RAET1LQ5VY80 246 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 DUX4L9Q6RFH8 374 aaPredicted RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 FAM92BQ6ZTR7 304 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 LINC00173Q6ZV60 143 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 OR4C5Q8NGB2 326 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 RBMXL1Q96E39 390 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 DUS3LQ96G46 650 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 TSSK3Q96PN8 268 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 TGS1Q96RS0 853 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 GABARAPL3Q9BY60 117 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 MRPL37Q9BZE1 423 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 LINC00597Q9H2U6 94 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 NSD2O96028 1365 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 DHX57Q6P158 1386 aaKnown RBP2.21□□□□□ -2.06
CCDC7-216ENST00000640058 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
CCDC7-216ENST00000640058 MN1Q10571 1320 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 AKNAQ7Z591 1439 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 COL5A1P20908 1838 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 IGHV5-51A0A0C4DH38 117 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 CTAGE15A4D2H0 777 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 OR2AG2A6NM03 316 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 C9JVG2 144 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 SPECC1L-ADORA2AF8WAN1 911 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 INS-IGF2F8WCM5 200 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 DYNC1I1O14576 645 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 RNF13O43567 381 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 ERLIN1O75477 346 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 AK4P27144 223 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 OTX1P32242 354 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 HRH1P35367 487 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 PRAMEF20Q5VT98 475 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 SPECC1LQ69YQ0 1117 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 SLC8B1Q6J4K2 584 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms