RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 MAGEC3Q8TD91 643 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 GPR151Q8TDV0 419 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 APH1AQ96BI3 265 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SMIM10Q96HG1 83 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SELENOSQ9BQE4 189 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 CHRNA10Q9GZZ6 450 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 GLIPR2Q9H4G4 154 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SLC40A1Q9NP59 571 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 ABCD2Q9UBJ2 740 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 HS3ST2Q9Y278 367 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 AMDHD2Q9Y303 409 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 LILRA5A6NI73 299 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 K7ESM1 405 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 ZNHIT1O43257 154 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 KLRC4O43908 158 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 ZMPSTE24O75844 475 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 CD160O95971 181 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 CD3GP09693 182 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 FAM157CP0CG43 387 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 SLC35E2BP0CK96 405 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 PGAM1P18669 254 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 PSMB5P28074 263 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 HMGCLP35914 325 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 ACTR1BP42025 376 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 RPL34P49207 117 aaKnown RBP6.27□□□□□ -1.41
NECAP1-220ENST00000639841 FAM189A2Q15884 450 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 C1orf189Q5VU69 101 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 LINC00336Q6ZUF6 198 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 ZNF554Q86TJ5 538 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 MCOLN2Q8IZK6 566 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 SLC25A45Q8N413 288 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 DHRSXQ8N5I4 330 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 CCDC112Q8NEF3 446 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 PDLIM2Q96JY6 352 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 CPXM1Q96SM3 734 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 NIPSNAP3BQ9BS92 247 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 FEM1AQ9BSK4 669 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 BDH2Q9BUT1 245 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 NAA50Q9GZZ1 169 aaKnown RBP6.27□□□□□ -1.41
NECAP1-220ENST00000639841 EBF2Q9HAK2 575 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 SIRT7Q9NRC8 400 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 LNPEPQ9UIQ6 1025 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 EXOSC1Q9Y3B2 195 aaKnown RBP6.27□□□□□ -1.41
NECAP1-220ENST00000639841 CFAP46Q8IYW2 2715 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 LAMA1P25391 3075 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 SPTA1P02549 2419 aa6.27□□□□□ -1.41
NECAP1-220ENST00000639841 SPTY2D1-AS1A0A0U1RR47 76 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 TMEM213A2RRL7 107 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ERI2A8K979 691 aaKnown RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 SNURFLB1AK76 121 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 H3BN98 237 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 LIN7AO14910 233 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 AQP9O43315 295 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 AP2A2O94973 939 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 VAMP5O95183 116 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 NGFRP08138 427 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CTXN2P0C2S0 81 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 TMED10P49755 219 aaKnown RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CDR2Q01850 454 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CHRNB3Q05901 458 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 SRSF1Q07955 248 aaKnown RBP eCLIP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 DUSP5Q16690 384 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 RPEL1Q2QD12 228 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 FAM153CQ494X1 144 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 HHATQ5VTY9 493 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 SETD3Q86TU7 594 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ZBED8Q8IZ13 594 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 OR2L13Q8N349 312 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ZNF786Q8N393 782 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 JAGN1Q8N5M9 183 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 MS4A15Q8N5U1 240 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 DCAF4L2Q8NA75 395 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 Q8TCH9 128 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 PAGE5Q96GU1 130 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CALN1Q9BXU9 219 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 NIPAL2Q9H841 368 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ZC4H2Q9NQZ6 224 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 APOBEC3BQ9UH17 382 aaKnown RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 NUMA1Q14980 2115 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 A0A0J9YVX5 310 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 LOC101059948A0A1B0GTJ6 334 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 M0QYV0 167 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 TM9SF1O15321 606 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 TNFSF15O95150 251 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 IFNA2P01563 188 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 KLK1P06870 262 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ITGA2P17301 1181 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CMA1P23946 247 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 KDELR2P33947 212 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 CX3CR1P49238 355 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 RPS24P62847 133 aaKnown RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 PAX2Q02962 417 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 TRAF3Q13114 568 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 ELOCQ15369 112 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 KCTD19Q17RG1 926 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-220ENST00000639841 BRMS1LQ5PSV4 323 aa6.26□□□□□ -1.41
NECAP1-220ENST00000639841 PRMT9Q6P2P2 845 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms