RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CCR6P51684 374 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 CLPPQ16740 277 aaPredicted RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 TMEM69Q5SWH9 247 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 C1orf210Q8IVY1 113 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 MR1Q95460 341 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 C7orf50Q9BRJ6 194 aaKnown RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 EMC6Q9BV81 110 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 CACNG6Q9BXT2 260 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 SERINC1Q9NRX5 453 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 FREM3P0C091 2139 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 CDK2P24941 298 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 PTH2RP49190 550 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 DYRK1AQ13627 763 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 TIGD3Q6B0B8 471 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 NDUFAF7Q7L592 441 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 CATSPERDQ86XM0 798 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 LINC00346Q8IVM7 164 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 OR2M3Q8NG83 312 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 OR52I2Q8NH67 350 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 THRSPQ92748 146 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 CMKLR1Q99788 373 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 PAQR5Q9NXK6 330 aaPredicted RBP19.25■□□□□ 0.67
CLN6-224ENST00000638076 MRPL15Q9P015 296 aaKnown RBP19.25■□□□□ 0.67
CLN6-224ENST00000638076 STEAP1Q9UHE8 339 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 BOLA1Q9Y3E2 137 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 LOC102723996A0A087X1L8 192 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 GABARAPH6UMI1 98 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 BIDP55957 195 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 FOXK1P85037 733 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 ZFP36L1Q07352 338 aaKnown RBP19.25■□□□□ 0.67
CLN6-224ENST00000638076 FAM205BPQ63HN1 556 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 SLC22A10Q63ZE4 541 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 DCXRQ7Z4W1 244 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 ZNF227Q86WZ6 799 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 ING3Q9NXR8 418 aa19.25■□□□□ 0.67
CLN6-224ENST00000638076 TEX51A0A1B0GUA7 166 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 UMODP07911 640 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 TRA2AQ13595 282 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-224ENST00000638076 C3orf33Q6P1S2 294 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 FAM198BQ6UWH4 519 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 ZC3H10Q96K80 434 aaKnown RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 PLEKHA1Q9HB21 404 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 FANCFQ9NPI8 374 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 AKAP7Q9P0M2 348 aaPredicted RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 COPZ2Q9P299 210 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 KLHL9Q9P2J3 617 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 B3GAT1Q9P2W7 334 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 FBXL3Q9UKT7 428 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 DHDHQ9UQ10 334 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 RPH3AQ9Y2J0 694 aaPredicted RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 PTRH2Q9Y3E5 179 aaKnown RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 RALGAPA1Q6GYQ0 2036 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 IGHV1-45A0A0A0MS14 117 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 SULT1B1O43704 296 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 KHDRBS3O75525 346 aaKnown RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 GSTT2P0CG29 244 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 GSTT2BP0CG30 244 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 PLA2G7Q13093 441 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 PRAMEF20Q5VT98 475 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 GLB1L2Q8IW92 636 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 WDSUB1Q8N9V3 476 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 ITGB1BP2Q9UKP3 347 aa19.24■□□□□ 0.67
CLN6-224ENST00000638076 CHCHD2Q9Y6H1 151 aaPredicted RBP19.24■□□□□ 0.67
CLN6-224ENST00000638076 A0A1W2PNV4 684 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 RGS13O14921 159 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 TMIGD3P0DMS9 266 aaPredicted RBP19.23■□□□□ 0.67
CLN6-224ENST00000638076 PTHLHP12272 177 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 CDK10Q15131 360 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 ST7LQ8TDW4 575 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 FCAMRQ8WWV6 532 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 PLSCR3Q9NRY6 295 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 KLK11Q9UBX7 282 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 RCE1Q9Y256 329 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 EMC9Q9Y3B6 208 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 A0A1W2PNR3 127 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 FAM172BPA6NC97 362 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 KRT33AO76009 404 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 CSRP1P21291 193 aaKnown RBP19.23■□□□□ 0.67
CLN6-224ENST00000638076 PCK2Q16822 640 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 ASPHD2Q6ICH7 369 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 OR4K17Q8NGC6 315 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 SCMH1Q96GD3 660 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 R4GMQ9 66 aa19.23■□□□□ 0.67
CLN6-224ENST00000638076 TP53I11O14683 189 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 SRSF10O75494 262 aaKnown RBP19.22■□□□□ 0.67
CLN6-224ENST00000638076 KLF7O75840 302 aaPredicted RBP19.22■□□□□ 0.67
CLN6-224ENST00000638076 AQP8O94778 261 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 SDHBP21912 280 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 HOXD12P35452 270 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 ASB5Q8WWX0 329 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 OR5B2Q96R09 309 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 C7orf66A4D0T2 115 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 C9J4A7 227 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 FAM47E-STBD1D6RA91 191 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 SCAND1P57086 179 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 TAS2R20P59543 309 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 MC2RQ01718 297 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 BCL2A1Q16548 175 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 LRFN4Q6PJG9 635 aa19.22■□□□□ 0.67
CLN6-224ENST00000638076 CORO6Q6QEF8 472 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms