RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 THEM4Q5T1C6 240 aa13.89□□□□□ -0.19
CLN3-255ENST00000637100 BPIFB2Q8N4F0 458 aa13.89□□□□□ -0.19
CLN3-255ENST00000637100 CCL17Q92583 94 aa13.89□□□□□ -0.19
CLN3-255ENST00000637100 C1orf147Q96MC9 270 aaPredicted RBP13.89□□□□□ -0.19
CLN3-255ENST00000637100 POLR2J2Q9GZM3 115 aaKnown RBP13.89□□□□□ -0.19
CLN3-255ENST00000637100 POLR2J3Q9H1A7 115 aaKnown RBP13.89□□□□□ -0.19
CLN3-255ENST00000637100 ZMAT3Q9HA38 289 aaKnown RBP13.89□□□□□ -0.19
CLN3-255ENST00000637100 ZDHHC8Q9ULC8 765 aa13.89□□□□□ -0.19
CLN3-255ENST00000637100 A0A1W2PRG6 482 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 A8MXK9 166 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 BLOC1S5-TXNDC5H3BN57 136 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 FOXH1O75593 365 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 OR7A10O76100 309 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 IGHV2-70P01814 119 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 FUT1P19526 365 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 DRD4P21917 467 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 PRTN3P24158 256 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
CLN3-255ENST00000637100 CDK5R2Q13319 367 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 SPRNQ5BIV9 151 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 UNQ6126/PRO20091Q6UXV3 157 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 LRRC18Q8N456 261 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 SLC25A40Q8TBP6 338 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 HDAC2Q92769 488 aaKnown RBP13.88□□□□□ -0.19
CLN3-255ENST00000637100 GAL3ST1Q99999 423 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 OR2J1Q9GZK6 312 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 RABEP2Q9H5N1 569 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 NANOGQ9H9S0 305 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 DDX28Q9NUL7 540 aaKnown RBP13.88□□□□□ -0.19
CLN3-255ENST00000637100 PCDHGB1Q9Y5G3 927 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 NPTNQ9Y639 398 aa13.88□□□□□ -0.19
CLN3-255ENST00000637100 F5H0A9 414 aaPredicted RBP13.87□□□□□ -0.19
CLN3-255ENST00000637100 CLDN34H7C241 214 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 F13BP05160 661 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 CST2P09228 141 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 GCH1P30793 250 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 CDAP32320 146 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 HSF2Q03933 536 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 TAF11Q15544 211 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 TMEM155Q4W5P6 130 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 KLF17Q5JT82 389 aaPredicted RBP13.87□□□□□ -0.19
CLN3-255ENST00000637100 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 NKAIN4Q8IVV8 208 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 ZNF283Q8N7M2 679 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 GPA33Q99795 319 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 EGLN1Q9GZT9 426 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 WNT5BQ9H1J7 359 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 TXNIPQ9H3M7 391 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 MMP26Q9NRE1 261 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 C20orf141Q9NUB4 165 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 PLEK2Q9NYT0 353 aa13.87□□□□□ -0.19
CLN3-255ENST00000637100 EIF3KQ9UBQ5 218 aaKnown RBP13.87□□□□□ -0.19
CLN3-255ENST00000637100 PURGQ9UJV8 347 aaKnown RBP13.87□□□□□ -0.19
CLN3-255ENST00000637100 PLSCR5A0PG75 271 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 C5orf49A4QMS7 147 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 HTR3EA5X5Y0 456 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 TRAPPC2LH3BP13 241 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 KPNA4O00629 521 aaPredicted RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 TPD52L2O43399 206 aaKnown RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 SPRY3O43610 288 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 SLC2A10O95528 541 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 NGFP01138 241 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 IGHMP01871 453 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 THRBP10828 461 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 UMPSP11172 480 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 NR2C1P13056 603 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 ZNF12P17014 697 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 TUBG1P23258 451 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 AQP2P41181 271 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 SLC6A9P48067 706 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 MTPNP58546 118 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 PPP1CBP62140 327 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 LCN2P80188 198 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 GLO1Q04760 184 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 OCLNQ16625 522 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 CYP51A1Q16850 503 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 INTS11Q5TA45 600 aaKnown RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 RFPL4BQ6ZWI9 263 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 DHDDSQ86SQ9 333 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 SYT9Q86SS6 491 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 SIGLECL1Q8N7X8 197 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 MOSPD2Q8NHP6 518 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 VANGL1Q8TAA9 524 aaPredicted RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 FNDC8Q8TC99 324 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 ALG12Q9BV10 488 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 OR2H1Q9GZK4 316 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 KCNN2Q9H2S1 579 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 PATZ1Q9HBE1 687 aaKnown RBP13.86□□□□□ -0.19
CLN3-255ENST00000637100 NPHS2Q9NP85 383 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 CCNB1IP1Q9NPC3 277 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 TUBG2Q9NRH3 451 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 NUP50Q9UKX7 468 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 HIF3AQ9Y2N7 669 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 NDUFAF1Q9Y375 327 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
CLN3-255ENST00000637100 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
CLN3-255ENST00000637100 POM121CA8CG34 1229 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms