RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CENPAP49450 140 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 TUBA1BP68363 451 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 TUBA4AP68366 448 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 GLO1Q04760 184 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 SEZ6L2Q6UXD5 910 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 TUBA1AQ71U36 451 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 CXXC5Q7LFL8 322 aaKnown RBP13.98□□□□□ -0.17
CLN6-216ENST00000636876 WFDC8Q8IUA0 241 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 SKA3Q8IX90 412 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 FAM81AQ8TBF8 368 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 TMEM163Q8TC26 289 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 ZNRF4Q8WWF5 429 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 ZC3HAV1LQ96H79 300 aaKnown RBP13.98□□□□□ -0.17
CLN6-216ENST00000636876 VCX3BQ9H321 246 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 IMPAD1Q9NX62 359 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 ZNF224Q9NZL3 707 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 GMPPBQ9Y5P6 360 aa13.98□□□□□ -0.17
CLN6-216ENST00000636876 CELSR2Q9HCU4 2923 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 LOC100130705A0A1B0GUX0 176 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 ZNF503-AS2A6NEH8 195 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 TLX2O43763 284 aaPredicted RBP13.97□□□□□ -0.17
CLN6-216ENST00000636876 MPZL1O95297 269 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 GPANK1O95872 356 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 HLA-HP01893 362 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 CST2P09228 141 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 EPXP11678 715 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 COX6B1P14854 86 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 COL8A1P27658 744 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 CAPZA2P47755 286 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 HSF2Q03933 536 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 KCNMB1Q16558 191 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 FAM27BQ5VT28 67 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 ALKBH2Q6NS38 261 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 SLC16A14Q7RTX9 510 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 DPPA2Q7Z7J5 298 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 DHRSXQ8N5I4 330 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 ZNF555Q8NEP9 628 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 BBS1Q8NFJ9 593 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 SLC26A10Q8NG04 563 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 OR8J1Q8NGP2 316 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 FGFBP3Q8TAT2 258 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 NANOS1Q8WY41 292 aaKnown RBP13.97□□□□□ -0.17
CLN6-216ENST00000636876 C11orf40Q8WZ69 217 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 IL4I1Q96RQ9 567 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 OR51V1Q9H2C8 321 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 EMC7Q9NPA0 242 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 B3GNT2Q9NY97 397 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 ZNF226Q9NYT6 803 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 KCNN3Q9UGI6 736 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
CLN6-216ENST00000636876 H0YJX3 145 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 CASKO14936 926 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 PRODHO43272 600 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 UBL3O95164 117 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 TFP02787 698 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 CD79AP11912 226 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 SLC2A5P22732 501 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 CRYGSP22914 178 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 PAX7P23759 505 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 LSM6P62312 80 aaKnown RBP13.96□□□□□ -0.17
CLN6-216ENST00000636876 KEAP1Q14145 624 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 ENDOGQ14249 297 aaKnown RBP13.96□□□□□ -0.17
CLN6-216ENST00000636876 LINC01590Q5TEZ4 76 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 TTC23Q5W5X9 447 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 FBXW10Q5XX13 1052 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 UGT2A3Q6UWM9 527 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 MDP1Q86V88 176 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 LRRC18Q8N456 261 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 TRUB1Q8WWH5 349 aaKnown RBP13.96□□□□□ -0.17
CLN6-216ENST00000636876 CYGBQ8WWM9 190 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 ZNF416Q9BWM5 594 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 NOX3Q9HBY0 568 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 NPAP1Q9NZP6 1156 aa13.96□□□□□ -0.17
CLN6-216ENST00000636876 ABCA4P78363 2273 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 C12orf71A8MTZ7 269 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 GLCEO94923 617 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 HLA-DQA2P01906 255 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 HRGP04196 525 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 MMP7P09237 267 aaPredicted RBP13.95□□□□□ -0.18
CLN6-216ENST00000636876 PATE4P0C8F1 98 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 FMO3P31513 532 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 BLVRAP53004 296 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 AQP4P55087 323 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 ADARB1P78563 741 aaKnown RBP13.95□□□□□ -0.18
CLN6-216ENST00000636876 TEKQ02763 1124 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 APOFQ13790 326 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 MEP1BQ16820 701 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 GSG1Q2KHT4 349 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 SLC36A2Q495M3 483 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 KLHL12Q53G59 568 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 SLC35D3Q5M8T2 416 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 AADACL4Q5VUY2 407 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 OTPQ5XKR4 325 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 TMEM53Q6P2H8 277 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 LYPD4Q6UWN0 246 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 BCDIN3DQ7Z5W3 292 aaKnown RBP13.95□□□□□ -0.18
CLN6-216ENST00000636876 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.95□□□□□ -0.18
CLN6-216ENST00000636876 DEPDC4Q8N2C3 294 aa13.95□□□□□ -0.18
CLN6-216ENST00000636876 FAM169BQ8N8A8 192 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms