RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RAP2BP61225 183 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 STEAP1BQ6NZ63 245 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 WDFY1Q8IWB7 410 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 GVQW1Q8N7I0 195 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 HOXB13Q92826 284 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF587Q96SQ5 575 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 MED29Q9NX70 200 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 hCG_1807616A0A1W2PRN6 198 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 H3BML4 177 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 RP2O75695 350 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 RLN2P04090 185 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 DLX5P56178 289 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PLCXD2Q0VAA5 305 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 NHLRC3Q5JS37 347 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 ELFN2Q5R3F8 820 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 OR6M1Q8NGM8 313 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PMM1Q92871 262 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 MFFQ9GZY8 342 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PTTG3PQ9NZH4 202 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 MKL2Q9ULH7 1088 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 OR2M5A3KFT3 312 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM212A6NML5 194 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF254O75437 659 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 RAB3DO95716 219 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 GNALP38405 381 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ARL4DP49703 201 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC17A1Q14916 467 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 TAF13Q15543 124 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 OLFML2AQ68BL7 652 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ELP2Q6IA86 826 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ANKRD16Q6P6B7 361 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 RHOUQ7L0Q8 258 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 NARS2Q96I59 477 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 LCORQ96JN0 433 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ABHD6Q9BV23 337 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 APOC3P02656 99 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 RORAP35398 523 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 NUP62P37198 522 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 CAPZBP47756 277 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 IL10RAQ13651 578 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 GFOD2Q3B7J2 385 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 OR1J2Q8NGS2 313 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 ARL5BQ96KC2 179 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 KCNMB2Q9Y691 235 aa12.63□□□□□ -0.39
CACNA1A-228ENST00000636610 P2RY10O00398 339 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SRPX2O60687 465 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 AKAIN1P0CW23 69 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PPP3CBP16298 524 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 AKR1C2P52895 323 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC25A1P53007 311 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 HSD17B7P56937 341 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 OR1D5P58170 312 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM225Q6GV28 225 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 KCTD20Q7Z5Y7 419 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PHYHIPQ92561 330 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 GPX7Q96SL4 187 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 CUTCQ9NTM9 273 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 LRP12Q9Y561 859 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PRSS37A4D1T9 235 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF749O43361 778 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SULT1B1O43704 296 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 IL33O95760 270 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC2A1P11166 492 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 DNASE1L1P49184 302 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 NR0B2Q15466 257 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 FNDC7Q5VTL7 733 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM81Q6P7N7 255 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 RNF144BQ7Z419 303 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 OR13C3Q8NGS6 347 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 GPR160Q9UJ42 338 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 HS3ST3A1Q9Y663 406 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 DRD1P21728 446 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PPICP45877 212 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 SKP1P63208 163 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 FAM69BQ5VUD6 431 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 KIAA0895LQ68EN5 471 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 CFAP77Q6ZQR2 320 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms