RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C16orf47Q6ZP98 133 aaPredicted RBP13.95□□□□□ -0.18
CLN8-209ENST00000635970 OR5J2Q8NH18 312 aa13.95□□□□□ -0.18
CLN8-209ENST00000635970 ASB13Q8WXK3 278 aa13.95□□□□□ -0.18
CLN8-209ENST00000635970 KAT2AQ92830 837 aa13.95□□□□□ -0.18
CLN8-209ENST00000635970 MS4A3Q96HJ5 214 aa13.95□□□□□ -0.18
CLN8-209ENST00000635970 SFXN2Q96NB2 322 aa13.95□□□□□ -0.18
CLN8-209ENST00000635970 SMAD5Q99717 465 aaKnown RBP13.95□□□□□ -0.18
CLN8-209ENST00000635970 MFSD2BA6NFX1 497 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 TRIM77I1YAP6 450 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 CREBL2O60519 120 aaPredicted RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 B3GALNT1O75752 331 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 RGS11O94810 467 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 IFI6P09912 130 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 DRD5P21918 477 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 RBM34P42696 430 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 MGAT2Q10469 447 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 JMJD6Q6NYC1 403 aaPredicted RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 LINGO2Q7L985 606 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 OVCH2Q7RTZ1 564 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 CMTM4Q8IZR5 234 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 OR7G2Q8NG99 324 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 PFN4Q8NHR9 129 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 ZNF559Q9BR84 538 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 C12orf4Q9NQ89 552 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 POLE3Q9NRF9 147 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 SDHAF2Q9NX18 166 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 COPS7AQ9UBW8 275 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 TUBD1Q9UJT1 453 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 A0A1W2PRG6 482 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 AIPO00170 330 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 MRPL3P09001 348 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 IL32P24001 234 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 HTR2AP28223 471 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 GALNSP34059 522 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 LGALS3BPQ08380 585 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 CRMP1Q14194 572 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 EXOSC7Q15024 291 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 TRMT12Q53H54 448 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 THSD4Q6ZMP0 1018 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 C7orf57Q8NEG2 295 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 LGALS14Q8TCE9 139 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 NSMAFQ92636 917 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 WBP1Q96G27 269 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 DEFB126Q9BYW3 111 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 REG4Q9BYZ8 158 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 SHARPINQ9H0F6 387 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 ENKD1Q9H0I2 346 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 TMEM27Q9HBJ8 222 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 DUSP22Q9NRW4 184 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 C20orf141Q9NUB4 165 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 MGAT4CQ9UBM8 478 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 PFDN2Q9UHV9 154 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 CSAG2Q9Y5P2 127 aa13.94□□□□□ -0.18
CLN8-209ENST00000635970 TLN1Q9Y490 2541 aaKnown RBP13.94□□□□□ -0.18
CLN8-209ENST00000635970 ANKRD20A5PA0PJZ0 165 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 TMEM200CA6NKL6 621 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 WDPCPO95876 746 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 CALCBP10092 127 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 NAT1P18440 290 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 ATF4P18848 351 aaPredicted RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 SRMP19623 302 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 S1PR1P21453 382 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 MAPK3P27361 379 aaPredicted RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 NOS3P29474 1203 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 NUP62P37198 522 aaPredicted RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 SLC37A1P57057 533 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 EXOSC6Q5RKV6 272 aaKnown RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 ZNF626Q68DY1 528 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 RGS7BPQ6MZT1 257 aaPredicted RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 H3F3CQ6NXT2 135 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 RPTNQ6XPR3 784 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 WDR88Q6ZMY6 472 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 BEST3Q8N1M1 668 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 MOSPD2Q8NHP6 518 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 PELI1Q96FA3 418 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 CNN2Q99439 309 aaKnown RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 STACQ99469 402 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 DDOQ99489 341 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 CDCP1Q9H5V8 836 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 NOX3Q9HBY0 568 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 PLA2G3Q9NZ20 509 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 PIPOXQ9P0Z9 390 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 ING1Q9UK53 422 aaPredicted RBP13.93□□□□□ -0.18
CLN8-209ENST00000635970 CLEC4AQ9UMR7 237 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
CLN8-209ENST00000635970 TRBV2A0A0J9YWF9 115 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 MCRIP1C9JLW8 97 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 SCAND1P57086 179 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 PSMA6P60900 246 aaKnown RBP13.92□□□□□ -0.18
CLN8-209ENST00000635970 RPS11P62280 158 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLN8-209ENST00000635970 RNF4P78317 190 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 FUT7Q11130 342 aa13.92□□□□□ -0.18
CLN8-209ENST00000635970 DUSP5Q16690 384 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms