RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ASCL3Q9NQ33 180 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 UBQLN2Q9UHD9 624 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PRSS50Q9UI38 385 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 ASB4Q9Y574 426 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 DMXL1Q9Y485 3027 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 TEX51A0A1B0GUA7 166 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.74
LINC00538-201ENST00000626109 EMC8O43402 210 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 CDRT1O95170 752 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 CSNK2A2P19784 350 aaPredicted RBP10.46□□□□□ -0.74
LINC00538-201ENST00000626109 SPINK2P20155 84 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 CAMPP49913 170 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 ST3GAL3Q11203 375 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 TRAM2Q15035 370 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 DDI2Q5TDH0 399 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 GDF7Q7Z4P5 450 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 NLGN4YQ8NFZ3 816 aaPredicted RBP10.46□□□□□ -0.74
LINC00538-201ENST00000626109 GPR151Q8TDV0 419 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 RFT1Q96AA3 541 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 ANGPTL4Q9BY76 406 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 SPRY4Q9C004 299 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 SLC22A4Q9H015 551 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 KRCC1Q9NPI7 259 aaPredicted RBP10.46□□□□□ -0.74
LINC00538-201ENST00000626109 TXNL4BQ9NX01 149 aaKnown RBP10.46□□□□□ -0.74
LINC00538-201ENST00000626109 OR6C3Q9NZP0 311 aa10.46□□□□□ -0.74
LINC00538-201ENST00000626109 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 DUXAA6NLW8 204 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 NPIPA2E9PIF3 369 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 RAD1O60671 282 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 CYP7B1O75881 506 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 TRAPPC2P0DI81 140 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 TRAPPC2BP0DI82 140 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 AZGP1P25311 298 aaKnown RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 APOBEC3AP31941 199 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 EFNB1P98172 346 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SPOCK1Q08629 439 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 TSPAN31Q12999 210 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 RAB32Q13637 225 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 TPBGQ13641 420 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SSX2Q16385 188 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 CARTPTQ16568 116 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 FAM131AQ6UXB0 335 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF517Q6ZMY9 492 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 RASSF6Q6ZTQ3 369 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 COX15Q7KZN9 410 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 IQCF1Q8N6M8 205 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 CYB561A3Q8NBI2 242 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 MORN4Q8NDC4 146 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 OR6T1Q8NGN1 323 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 OR52N1Q8NH53 320 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 GLYATL2Q8WU03 294 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 OIT3Q8WWZ8 545 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ASB15Q8WXK1 588 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 OSTF1Q92882 214 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF486Q96H40 463 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 PGAM5Q96HS1 289 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF578Q96N58 590 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 BARHL1Q9BZE3 327 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 OR2B2Q9GZK3 357 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 HIPK2Q9H2X6 1198 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SLC22A11Q9NSA0 550 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 C14orf105Q9NVL8 296 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 POU2F3Q9UKI9 436 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 WASF3Q9UPY6 502 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ATG4BQ9Y4P1 393 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SPIN1Q9Y657 262 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF780BQ9Y6R6 833 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 A0A1W2PR48 441 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 FABP12A6NFH5 140 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 AIFM1O95831 613 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 HMGN2P05204 90 aaKnown RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 CHRM4P08173 479 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ADRB1P08588 477 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 IL12BP29460 328 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 DCTDP32321 178 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SDC2P34741 201 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 THBS2P35442 1172 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 MTNR1AP48039 350 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 EMP2P54851 167 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 CCDC58Q4VC31 144 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 RAET1LQ5VY80 246 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ACSM5Q6NUN0 579 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 FAM198BQ6UWH4 519 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF730Q6ZMV8 503 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 TIPARPQ7Z3E1 657 aaKnown RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 MRGPREQ86SM8 312 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 PIGXQ8TBF5 258 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 PTPMT1Q8WUK0 201 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 DIRAS2Q96HU8 199 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SRRQ9GZT4 340 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 PLK3Q9H4B4 646 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 C19orf12Q9NSK7 152 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 ERRFI1Q9UJM3 462 aaPredicted RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 NXT1Q9UKK6 140 aaKnown RBP10.45□□□□□ -0.74
LINC00538-201ENST00000626109 V9GYH0 126 aa10.45□□□□□ -0.74
LINC00538-201ENST00000626109 SPTBP11277 2137 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 IGLV3-12A0A075B6K2 115 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 A0A0A6YYH2 397 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms