RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OR51S1Q8NGJ8 323 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR6N2Q8NGY6 317 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR2G2Q8NGZ5 317 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PHOSPHO1Q8TCT1 267 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 EDARADDQ8WWZ3 215 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 HRASLS2Q9NWW9 162 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 HIF3AQ9Y2N7 669 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 A0A0J9YY10 115 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 A0A1B0GTH9 108 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 A6NCN8 305 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 TVP23AA6NH52 213 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 TMEM200CA6NKL6 621 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR4C45A6NMZ5 311 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 C4orf47A7E2U8 309 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ABHD16AO95870 558 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SELLP14151 372 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PRF1P14222 555 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SDHAP31040 664 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ADH7P40394 386 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SORDQ00796 357 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PLA2G7Q13093 441 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 MPPED2Q15777 294 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ZNF124Q15973 351 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ITPRIPL2Q3MIP1 535 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR7E24Q6IFN5 339 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 NPSR1Q6W5P4 371 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 CDC20BQ86Y33 519 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 STX12Q86Y82 276 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ZNF440Q8IYI8 595 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 OR9A4Q8NGU2 314 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 TWSG1Q9GZX9 223 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 EXO5Q9H790 373 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SPAG17Q6Q759 2223 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 TRAV18A0A075B6X5 111 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 H3BSH0 61 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 HRKO00198 91 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 CTAG2O75638 210 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PRSS3P35030 304 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 DCDP81605 110 aaKnown RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 ODF4Q2M2E3 257 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 YOD1Q5VVQ6 348 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 H3F3CQ6NXT2 135 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 CCNL2Q96S94 520 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 GRHPRQ9UBQ7 328 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ZNF629Q9UEG4 869 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 TMEM14AQ9Y6G1 99 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PTPRSQ13332 1948 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SCN2AQ99250 2005 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PTPRZ1P23471 2315 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 CABIN1Q9Y6J0 2220 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 IGKV1D-42A0A075B6H8 117 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
VCL-207ENST00000624354 CDC40O60508 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
VCL-207ENST00000624354 APBB3O95704 486 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 F13BP05160 661 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 PNMTP11086 282 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 CSF2RBP32927 897 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 POU3F4P49335 361 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 CCR4P51679 360 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 GUCA2AQ02747 115 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 RASGEF1BQ0VAM2 473 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 ECH1Q13011 328 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 ZNF74Q16587 644 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 RNF212Q495C1 297 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 DPY19L4Q7Z388 723 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 OOSP2Q86WS3 158 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 EXD3Q8N9H8 876 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 OR10AC1Q8NH08 325 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 TSEN15Q8WW01 171 aaKnown RBP7.87□□□□□ -1.15
VCL-207ENST00000624354 ASB13Q8WXK3 278 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 THRSPQ92748 146 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 WNT2BQ93097 391 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 RELTQ969Z4 430 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 SLC25A28Q96A46 364 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 FAM131CQ96AQ9 280 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MNTQ99583 582 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 WDR76Q9H967 626 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 SDHAF3Q9NRP4 125 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 UPB1Q9UBR1 384 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MKL2Q9ULH7 1088 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 OR14I1A6ND48 311 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MEIS3P1A6NDR6 274 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 OR2W5A6NFC9 320 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 DCTN6O00399 190 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 CD3DP04234 171 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 FBP1P09467 338 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 HPGDP15428 266 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 KIR2DL1P43626 348 aaPredicted RBP7.87□□□□□ -1.15
VCL-207ENST00000624354 EFNB2P52799 333 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 EGR3Q06889 387 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 WBP2NLQ6ICG8 309 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 NAA40Q86UY6 237 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 BCORP1Q8N888 145 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 GATSQ8NAP1 163 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms