RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SEMA6CQ9H3T2 930 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 WDR76Q9H967 626 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 ZMAT3Q9HA38 289 aaKnown RBP12.75□□□□□ -0.37
LDB3-209ENST00000623056 ACKR4Q9NPB9 350 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 MMP26Q9NRE1 261 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 KLK13Q9UKR3 277 aa12.75□□□□□ -0.37
LDB3-209ENST00000623056 IGKV1D-42A0A075B6H8 117 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 CD14P08571 375 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 ALOX5APP20292 161 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 EGR3Q06889 387 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 HABP2Q14520 560 aaPredicted RBP12.74□□□□□ -0.37
LDB3-209ENST00000623056 ELOCQ15369 112 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 BAP18Q8IXM2 172 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 OR5T3Q8NGG3 340 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 MITD1Q8WV92 249 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 SUSD6Q92537 303 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 AMELYQ99218 206 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 SELENOIQ9C0D9 397 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 TRAV20A0A0B4J274 112 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 C9orf170A2RU37 121 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 EEF1E1-BLOC1S5C9J1V9 151 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 DOK2O60496 412 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 GPANK1O95872 356 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 IL2RAP01589 272 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 LINC00271P0C7V0 271 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 SMIM6P0DI80 62 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 CTXN1P60606 82 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 RNF44Q7L0R7 432 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 CD163Q86VB7 1156 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 OR4S1Q8NGB4 309 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 OR4K17Q8NGC6 315 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 FAM174AQ8TBP5 190 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 TMED6Q8WW62 240 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 C3orf49Q96BT1 292 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 FOXRED1Q96CU9 486 aaPredicted RBP12.74□□□□□ -0.37
LDB3-209ENST00000623056 PHB2Q99623 299 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 SLCO5A1Q9H2Y9 848 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 DHCR7Q9UBM7 475 aaKnown RBP12.74□□□□□ -0.37
LDB3-209ENST00000623056 PILRAQ9UKJ1 303 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 HEATR5AQ86XA9 2040 aa12.74□□□□□ -0.37
LDB3-209ENST00000623056 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
LDB3-209ENST00000623056 TEX13DA0A0J9YY54 714 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 URADA6NGE7 173 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 CYR61O00622 381 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 F13BP05160 661 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZNF10P21506 573 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 SDHAP31040 664 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 GRK6P43250 576 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 RGS19P49795 217 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 SKP1P63208 163 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PJVKQ0ZLH3 352 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 AIMP2Q13155 320 aaKnown RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 PEA15Q15121 130 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 MST1LQ2TV78 715 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 AGBL4Q5VU57 503 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PAPD4Q6PIY7 484 aaKnown RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 ABHD13Q7L211 337 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PARGQ86W56 976 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 C10orf53Q8N6V4 93 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 DCUN1D4Q92564 292 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 MRGPRFQ96AM1 343 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 CPNE2Q96FN4 548 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 DEC1Q9P2X7 70 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 FAM96BQ9Y3D0 163 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 CSAG2Q9Y5P2 127 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 MPDZO75970 2070 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 A0A0B4J2A0 478 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 TTLL8A6PVC2 850 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 COLCA2A8K830 154 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 EFCAB7A8K855 629 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZNF705EA8MWA4 302 aaPredicted RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 FARS2O95363 451 aaKnown RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZNF806P0C7X5 589 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 FAM157CP0CG43 387 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 HTR2CP28335 458 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PPICP45877 212 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PGDP52209 483 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 RAB5BP61020 215 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 CXADRP78310 365 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 IL13RA1P78552 427 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 PMPCAQ10713 525 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ECH1Q13011 328 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 TCEA2Q15560 299 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZNF141Q15928 474 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 GFOD2Q3B7J2 385 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ALG10Q5BKT4 473 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 FCRL6Q6DN72 434 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms