RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ERVK-25P63136 954 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 PRKCDQ05655 676 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 ANKDD1AQ495B1 522 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 FAM27BQ5VT28 67 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 LIPNQ5VXI9 398 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 FKBP9P1Q75LS8 142 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 RNF113BQ8IZP6 322 aaKnown RBP20.52■□□□□ 0.88
ATXN3-253ENST00000621269 AKR7LQ8NHP1 331 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 GEMIN6Q8WXD5 167 aaKnown RBP20.52■□□□□ 0.88
ATXN3-253ENST00000621269 DECR2Q9NUI1 292 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 GMPR2Q9P2T1 348 aaKnown RBP20.52■□□□□ 0.88
ATXN3-253ENST00000621269 SNX13Q9Y5W8 968 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 FBN3Q75N90 2809 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 TRAV27A0A087WT01 109 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 C5orf49A4QMS7 147 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 J3KTA2 159 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 TPD52L2O43399 206 aaKnown RBP20.51■□□□□ 0.87
ATXN3-253ENST00000621269 CDC14BO60729 498 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 GCH1P30793 250 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 PSG4Q00888 419 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 TEKQ02763 1124 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 IFI44LQ53G44 452 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 ZNF730Q6ZMV8 503 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 MEX3DQ86XN8 651 aaKnown RBP20.51■□□□□ 0.87
ATXN3-253ENST00000621269 ALDH16A1Q8IZ83 802 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 POM121L2Q96KW2 1035 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 RACGAP1Q9H0H5 632 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 EFCAB1Q9HAE3 211 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 MAN2C1Q9NTJ4 1040 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 NKIRAS2Q9NYR9 191 aa20.51■□□□□ 0.87
ATXN3-253ENST00000621269 RP2O75695 350 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 IGHV3-13P01766 116 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 FUT4P22083 530 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 LAP3P28838 519 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 SLC9A3P48764 834 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 SLC7A2P52569 658 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 PCBD1P61457 104 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 SRSF2Q01130 221 aaKnown RBP20.5■□□□□ 0.87
ATXN3-253ENST00000621269 GLO1Q04760 184 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 ZNF718Q3SXZ3 478 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 RINLQ6ZS11 566 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 CBLL1Q75N03 491 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 RRM2BQ7LG56 351 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 CLDN22Q8N7P3 220 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 LRRC75AQ8NAA5 344 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 ACOT11Q8WXI4 607 aaPredicted RBP20.5■□□□□ 0.87
ATXN3-253ENST00000621269 TREM2Q9NZC2 230 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 TIMM10BQ9Y5J6 103 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 SVEP1Q4LDE5 3571 aa20.5■□□□□ 0.87
ATXN3-253ENST00000621269 A0A1W2PPL8 197 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 FFAR1O14842 300 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 WNT9BO14905 357 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 CST2P09228 141 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 RPL4P36578 427 aaKnown RBP20.49■□□□□ 0.87
ATXN3-253ENST00000621269 MBOAT2Q6ZWT7 520 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 CYP4Z1Q86W10 505 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 C1orf174Q8IYL3 243 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 OR13C2Q8NGS9 318 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 HSH2DQ96JZ2 352 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 C19orf24Q9BVV8 132 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 OR2H1Q9GZK4 316 aa20.49■□□□□ 0.87
ATXN3-253ENST00000621269 LOC100509620A0A075B734 347 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 IGHV1-69-2A0A0G2JMI3 117 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 NME4O00746 187 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 NDUFAB1O14561 156 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 SERPINA1P01009 418 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 GAAP10253 952 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 MDH1P40925 334 aaKnown RBP20.48■□□□□ 0.87
ATXN3-253ENST00000621269 CRYBB2P43320 205 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 TSTQ16762 297 aaKnown RBP20.48■□□□□ 0.87
ATXN3-253ENST00000621269 SPATA46Q5T0L3 261 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 ZNF101Q8IZC7 436 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 RFLNBQ8N5W9 214 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 FAM162AQ96A26 154 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 TMEM186Q96B77 213 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 NDEL1Q9GZM8 345 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 LPAR2Q9HBW0 351 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 HIF1ANQ9NWT6 349 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 GRHPRQ9UBQ7 328 aa20.48■□□□□ 0.87
ATXN3-253ENST00000621269 A0A087WUU8 490 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 PLSCR5A0PG75 271 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 FAM157AC9JC47 383 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 TCF21O43680 179 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 MSMBP08118 114 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 WNT5AP41221 380 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 GSK3BP49841 420 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 ZNF81P51508 661 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 MVKQ03426 396 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 FHL1Q13642 323 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 TBPL2Q6SJ96 375 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 OR51F2Q8NH61 342 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 ABHD4Q8TB40 342 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 SLC25A40Q8TBP6 338 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 GTF3AQ92664 365 aaKnown RBP20.47■□□□□ 0.87
ATXN3-253ENST00000621269 MARS2Q96GW9 593 aaKnown RBP20.47■□□□□ 0.87
ATXN3-253ENST00000621269 KCTD14Q9BQ13 255 aaPredicted RBP20.47■□□□□ 0.87
ATXN3-253ENST00000621269 WNT5BQ9H1J7 359 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 SAP30LQ9HAJ7 183 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 GRIP1Q9Y3R0 1128 aa20.47■□□□□ 0.87
ATXN3-253ENST00000621269 C12orf71A8MTZ7 269 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms