RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ACSM3Q53FZ2 586 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 C5orf46Q6UWT4 87 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 NR2C2APQ86WQ0 139 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 HAVCR2Q8TDQ0 301 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 CCDC120Q96HB5 630 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 ACKR4Q9NPB9 350 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 MYO7BQ6PIF6 2116 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 OR14I1A6ND48 311 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 GPRIN2O60269 458 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 NPIPB7O75200 414 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 GATBO75879 557 aaKnown RBP19.2■□□□□ 0.66
SGMS1-210ENST00000619438 AZGP1P25311 298 aaKnown RBP19.2■□□□□ 0.66
SGMS1-210ENST00000619438 HCCSP53701 268 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 TOMM34Q15785 309 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-210ENST00000619438 ZNF684Q5T5D7 378 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 RPTNQ6XPR3 784 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 SLC16A9Q7RTY1 509 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 KCTD20Q7Z5Y7 419 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 OR5M9Q8NGP3 310 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 GPR119Q8TDV5 335 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 SARAFQ96BY9 339 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 SNX18Q96RF0 628 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 MNTQ99583 582 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 ALKBH4Q9NXW9 302 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 GRHPRQ9UBQ7 328 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 COPS3Q9UNS2 423 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 MEMO1Q9Y316 297 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 CRYBG3Q68DQ2 2970 aa19.2■□□□□ 0.66
SGMS1-210ENST00000619438 GTF3C1Q12789 2109 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 SELENOFO60613 162 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 THBS2P35442 1172 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 ACVR1BP36896 505 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 RFX2P48378 723 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 GDI2P50395 445 aaKnown RBP19.19■□□□□ 0.66
SGMS1-210ENST00000619438 PYDC2Q56P42 97 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 MAMDC2Q7Z304 686 aaPredicted RBP19.19■□□□□ 0.66
SGMS1-210ENST00000619438 GRINAQ7Z429 371 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 IL17RDQ8NFM7 739 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 OR6K6Q8NGW6 343 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 STK35Q8TDR2 534 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 ZCCHC4Q9H5U6 513 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 NPAP1Q9NZP6 1156 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 CENPEQ02224 2701 aa19.19■□□□□ 0.66
SGMS1-210ENST00000619438 A0A0G2JK05 382 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 A0A1B0GVC2 190 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 ANKRD61A6NGH8 418 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 AQP7O14520 342 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 CBR3O75828 277 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 ARL6IP5O75915 188 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 PTGDSP41222 190 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 HTR3AP46098 478 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 RPS5P46782 204 aaKnown RBP19.18■□□□□ 0.66
SGMS1-210ENST00000619438 DLX5P56178 289 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 MRPL28Q13084 256 aaKnown RBP19.18■□□□□ 0.66
SGMS1-210ENST00000619438 QPRTQ15274 297 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 ZNF585AQ6P3V2 769 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 NRARPQ7Z6K4 114 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 MRGPRGQ86SM5 289 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 OR2T4Q8NH00 348 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 OR6S1Q8NH40 331 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 RNF138Q8WVD3 245 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 TSPAN32Q96QS1 320 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 PTDSS2Q9BVG9 487 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 SLC22A4Q9H015 551 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 SLC6A15Q9H2J7 730 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 TP63Q9H3D4 680 aaPredicted RBP19.18■□□□□ 0.66
SGMS1-210ENST00000619438 RPRD1BQ9NQG5 326 aaKnown RBP19.18■□□□□ 0.66
SGMS1-210ENST00000619438 MPDZO75970 2070 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 NBPF19A0A087WUL8 3843 aa19.18■□□□□ 0.66
SGMS1-210ENST00000619438 TMED7-TICAM2A0A0A6YYA0 188 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 A8MVM7 634 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 E9PLN8 166 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 UCHL1P09936 223 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SUMO3P55854 103 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SGCBQ16585 318 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 MESTQ5EB52 335 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 FAM69AQ5T7M9 428 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 OR5M10Q6IEU7 315 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SFXN4Q6P4A7 337 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 UNQ9370/PRO34162Q6UXP9 181 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 LRRC28Q86X40 367 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-210ENST00000619438 VKORC1Q9BQB6 163 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SDHAF3Q9NRP4 125 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 CYSLTR2Q9NS75 346 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 TAS2R10Q9NYW0 307 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 GNG8Q9UK08 70 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 TMED7Q9Y3B3 224 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 WIF1Q9Y5W5 379 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SCO2O43819 266 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 NUDT14O95848 222 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 RENP00797 406 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 F13BP05160 661 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 RPS11P62280 158 aaKnown RBP eCLIP19.17■□□□□ 0.66
SGMS1-210ENST00000619438 ADGRG3Q86Y34 549 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 TIGD4Q8IY51 512 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 TAS2R5Q9NYW4 299 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 ZNF407Q9C0G0 2248 aa19.17■□□□□ 0.66
SGMS1-210ENST00000619438 SSX4O60224 188 aa19.16■□□□□ 0.66
SGMS1-210ENST00000619438 HPNP05981 417 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms