RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 DDX28Q9NUL7 540 aaKnown RBP15.16■□□□□ 0.02
SMN2-213ENST00000614240 GMNCA6NCL1 334 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 LIPAP38571 399 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 WNT5AP41221 380 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 ERVK-25P63136 954 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 PSG4Q00888 419 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 FMODQ06828 376 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 TOP3AQ13472 1001 aaPredicted RBP15.15■□□□□ 0.02
SMN2-213ENST00000614240 BEND6Q5SZJ8 279 aaPredicted RBP15.15■□□□□ 0.02
SMN2-213ENST00000614240 ARMC4Q5T2S8 1044 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 NKAIN4Q8IVV8 208 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
SMN2-213ENST00000614240 TMEM239Q8WW34 195 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 OR2J1Q9GZK6 312 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 SMURF2Q9HAU4 748 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 NTN4Q9HB63 628 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 C20orf141Q9NUB4 165 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 RIMS3Q9UJD0 308 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 BAG5Q9UL15 447 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 MED31Q9Y3C7 131 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 DYSFO75923 2080 aa15.15■□□□□ 0.02
SMN2-213ENST00000614240 LOC100509620A0A075B734 347 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 ZSCAN5BA6NJL1 495 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 SHOX2O60902 331 aaPredicted RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 PRSS23O95084 383 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 TNFRSF1BP20333 461 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 MMP15P51511 669 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 ARHGDIAP52565 204 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 ZNF133P52736 654 aaPredicted RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 PPP1CBP62140 327 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 CYLC2Q14093 348 aaPredicted RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 LAPTM4AQ15012 233 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 TAF11Q15544 211 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 AWAT1Q58HT5 328 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 ZMAT1Q5H9K5 638 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 MBNL2Q5VZF2 373 aaKnown RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 C1orf174Q8IYL3 243 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 TSPEARQ8WU66 669 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 HDAC2Q92769 488 aaKnown RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 RBP7Q96R05 134 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 DCLRE1CQ96SD1 692 aaKnown RBP15.14■□□□□ 0.01
SMN2-213ENST00000614240 ZDHHC8Q9ULC8 765 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 UGT2A1Q9Y4X1 527 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 PPIAL4AQ9Y536 164 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 TIMM10BQ9Y5J6 103 aa15.14■□□□□ 0.01
SMN2-213ENST00000614240 TENM1Q9UKZ4 2725 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 FOXH1O75593 365 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 UBOX5O94941 541 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 OR5F1O95221 314 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 IFNA14P01570 189 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 SBK2P0C263 348 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 PCBD1P61457 104 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 TNFAIP6P98066 277 aaPredicted RBP15.13■□□□□ 0.01
SMN2-213ENST00000614240 PIN1Q13526 163 aaPredicted RBP15.13■□□□□ 0.01
SMN2-213ENST00000614240 FAM27BQ5VT28 67 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ARL9Q6T311 187 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 CCDC80Q76M96 950 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ZDHHC22Q8N966 263 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 NABP1Q96AH0 204 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ATP6V1G3Q96LB4 118 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 DIRC2Q96SL1 478 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 SH3GL1Q99961 368 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ECSITQ9BQ95 431 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 OR2H1Q9GZK4 316 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 POLR2J2Q9GZM3 115 aaKnown RBP15.13■□□□□ 0.01
SMN2-213ENST00000614240 POLR2J3Q9H1A7 115 aaKnown RBP15.13■□□□□ 0.01
SMN2-213ENST00000614240 TXNIPQ9H3M7 391 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ELOVL3Q9HB03 270 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 MSL2Q9HCI7 577 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 ESM1Q9NQ30 184 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 CGGBP1Q9UFW8 167 aaPredicted RBP15.13■□□□□ 0.01
SMN2-213ENST00000614240 OPN4Q9UHM6 478 aa15.13■□□□□ 0.01
SMN2-213ENST00000614240 IGKV1D-43A0A0B4J1Z2 117 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 TIMM8AO60220 97 aaPredicted RBP15.12■□□□□ 0.01
SMN2-213ENST00000614240 IGF2P01344 180 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 LAP3P28838 519 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 CRYBA2P53672 197 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
SMN2-213ENST00000614240 ALG10Q5BKT4 473 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 ARMCX4Q5H9R4 360 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 SLC25A47Q6Q0C1 308 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 RFPL4BQ6ZWI9 263 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 ZER1Q7Z7L7 766 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 GEMIN6Q8WXD5 167 aaKnown RBP15.12■□□□□ 0.01
SMN2-213ENST00000614240 ALG12Q9BV10 488 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 WNT5BQ9H1J7 359 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 INTS9Q9NV88 658 aaKnown RBP15.12■□□□□ 0.01
SMN2-213ENST00000614240 NPTNQ9Y639 398 aa15.12■□□□□ 0.01
SMN2-213ENST00000614240 A0A1W2PPL8 197 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 NPIPB13A6NJU9 1138 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 NPIPB4C9JG80 1138 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 NGFP01138 241 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 ADH4P08319 380 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 CST2P09228 141 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 TNFSF4P23510 183 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 IFNA8P32881 189 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 OR1E2P47887 323 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 GZMMP51124 257 aa15.11■□□□□ 0.01
SMN2-213ENST00000614240 RPL27P61353 136 aaKnown RBP15.11■□□□□ 0.01
SMN2-213ENST00000614240 FOXL1Q12952 345 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms