RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GPR3P46089 330 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 SYT14P1Q58G82 188 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF628Q5EBL2 1059 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 C9orf152Q5JTZ5 239 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 TMEM201Q5SNT2 666 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 VASNQ6EMK4 673 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 NHLRC1Q6VVB1 395 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF687Q8N1G0 1237 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 OR52B4Q8NGK2 314 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 MCTS1Q9ULC4 181 aaKnown RBP9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZAR1LA6NP61 321 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 MKRN2OSH3BPM6 223 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 MAGEB4O15481 346 aaPredicted RBP9.86□□□□□ -0.83
FAM3A-221ENST00000612856 NKX2-8O15522 239 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 GDNFP39905 211 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 CXADRP78310 365 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 CBFBQ13951 182 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 WIPI1Q5MNZ9 446 aaPredicted RBP9.86□□□□□ -0.83
FAM3A-221ENST00000612856 OR7E24Q6IFN5 339 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 DNM1P34Q6PK57 102 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF627Q7L945 461 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZADH2Q8N4Q0 377 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 POGLUT1Q8NBL1 392 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF582Q96NG8 517 aaPredicted RBP9.86□□□□□ -0.83
FAM3A-221ENST00000612856 SEMA4CQ9C0C4 833 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 SYT4Q9H2B2 425 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 AUNIPQ9H7T9 357 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 DUSP13Q9UII6 198 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 EXOSC1Q9Y3B2 195 aaKnown RBP9.86□□□□□ -0.83
FAM3A-221ENST00000612856 ADAM18Q9Y3Q7 739 aa9.86□□□□□ -0.83
FAM3A-221ENST00000612856 A0A1W2PQM1 296 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 HMGN4O00479 90 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 DVL2O14641 736 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ZNHIT1O43257 154 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ANKRD34CP0C6C1 535 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF35P13682 527 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 SLC6A1P30531 599 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ARFRP1Q13795 201 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 C3AR1Q16581 482 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NIPAL3Q6P499 406 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 C19orf48Q6RUI8 117 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 TMEM52Q8NDY8 209 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PFN4Q8NHR9 129 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 MS4A3Q96HJ5 214 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NMNAT3Q96T66 252 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 C20orf85Q9H1P6 137 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF879B4DU55 563 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 CXCL13O43927 109 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NDUFB2O95178 105 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 F12P00748 615 aaPredicted RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PDZK1IP1Q13113 114 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ULK3Q6PHR2 472 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 TMUB2Q71RG4 321 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PXT1Q8NFP0 134 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PAQR8Q8TEZ7 354 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 SCARB1Q8WTV0 552 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 Q96M85 177 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 KLHL15Q96M94 604 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 TAAR9Q96RI9 348 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 MICU1Q9BPX6 476 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 TGIF2Q9GZN2 237 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 LHX9Q9NQ69 397 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 MED29Q9NX70 200 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NXT1Q9UKK6 140 aaKnown RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 CHST2Q9Y4C5 530 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 THADAQ6YHU6 1953 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 A0A096LPE4 126 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 A0A1W2PPZ6 126 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 A0A1W2PR80 420 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 M0R036 132 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 OIP5O43482 229 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NDUFS6O75380 124 aaKnown RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 MRPL33O75394 65 aaKnown RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NTN1O95631 604 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 SLC1A3P43003 542 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 FASLGP48023 281 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PTH2RP49190 550 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 RAB13P51153 203 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF84P51523 738 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 UBE2IP63279 158 aaKnown RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 FAM53BQ14153 422 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 METTL11BQ5VVY1 283 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 BCORP1Q8N888 145 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 DDIT4LQ96D03 193 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 NEURL3Q96EH8 262 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PGAM5Q96HS1 289 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ULBP2Q9BZM5 246 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PPP1R3EQ9H7J1 279 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ING1Q9UK53 422 aaPredicted RBP9.85□□□□□ -0.83
FAM3A-221ENST00000612856 ADAM29Q9UKF5 820 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 PILRBQ9UKJ0 227 aa9.85□□□□□ -0.83
FAM3A-221ENST00000612856 SCN8AQ9UQD0 1980 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 RPS10-NUDT3A0A1W2PQS6 291 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ZC3H12DA2A288 527 aaKnown RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PRAMEF25A6NGN4 478 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF593O00488 134 aaPredicted RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ZNF254O75437 659 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 MAS1P04201 325 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms