RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 C22orf42Q6IC83 251 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 SLC18B1Q6NT16 456 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 ARL9Q6T311 187 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 FAM220AQ7Z4H9 259 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.93□□□□□ -1.14
CCDC47-207ENST00000612558 FAM109AQ8N4B1 249 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 MS4A15Q8N5U1 240 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 SLC26A10Q8NG04 563 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 OR9K2Q8NGE7 335 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 OR10D3Q8NH80 312 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 THEM6Q8WUY1 208 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 ASB17Q8WXJ9 295 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 CPNE4Q96A23 557 aaPredicted RBP7.93□□□□□ -1.14
CCDC47-207ENST00000612558 KCTD7Q96MP8 289 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 UCN2Q96RP3 112 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 ACKR4Q9NPB9 350 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 CCDC59Q9P031 241 aaKnown RBP7.93□□□□□ -1.14
CCDC47-207ENST00000612558 ST6GALNAC2Q9UJ37 374 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 KLHDC2Q9Y2U9 406 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 A3GALT2U3KPV4 340 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 PMF1-BGLAPU3KQ54 211 aa7.93□□□□□ -1.14
CCDC47-207ENST00000612558 CELSR3Q9NYQ7 3312 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 IGHV3-15A0A0B4J1V0 119 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 IGKV1D-43A0A0B4J1Z2 117 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 TRBV2A0A0J9YWF9 115 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 HSPB2A8KAH6 182 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 PRR32B1ATL7 298 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 DLL1O00548 723 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 GABRPO00591 440 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SMAD9O15198 467 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 KLK10O43240 276 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 CXCL13O43927 109 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 RGS9O75916 674 aaPredicted RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 AQP8O94778 261 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 IL1AP01583 271 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 CELA3AP09093 270 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SPARCP09486 303 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 LAP3P28838 519 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 RPS19P39019 145 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 RPS27P42677 84 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 TGM4P49221 684 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 LHX2P50458 406 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 ROR2Q01974 943 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SLC3A1Q07837 685 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SLC10A1Q14973 349 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 CDK5R1Q15078 307 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 HSPB2Q16082 182 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 BCL2A1Q16548 175 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MOGQ16653 247 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 PCK2Q16822 640 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF404Q494X3 552 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 CARD17Q5XLA6 110 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 KCTD18Q6PI47 426 aaPredicted RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SLC25A47Q6Q0C1 308 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 RPTNQ6XPR3 784 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 GLB1L2Q8IW92 636 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 YIPF7Q8N8F6 280 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MCFD2Q8NI22 146 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 ABHD4Q8TB40 342 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 NSMAFQ92636 917 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 GHSRQ92847 366 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MCHR2Q969V1 340 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 INTS12Q96CB8 462 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 SMIM19Q96E16 107 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 PGLYRP3Q96LB9 341 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 FOXN4Q96NZ1 517 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 TTYH2Q9BSA4 534 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MED18Q9BUE0 208 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 HDHD5Q9BXW7 423 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 KCNN2Q9H2S1 579 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MMP27Q9H306 513 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 ACOXLQ9NUZ1 547 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 GALNT8Q9NY28 637 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 MRM2Q9UI43 246 aaKnown RBP7.92□□□□□ -1.14
CCDC47-207ENST00000612558 KCNG2Q9UJ96 466 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 GRIP1Q9Y3R0 1128 aa7.92□□□□□ -1.14
CCDC47-207ENST00000612558 ACACAQ13085 2346 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 PHF3Q92576 2039 aaKnown RBP7.91□□□□□ -1.14
CCDC47-207ENST00000612558 TRAV17A0A0B4J275 112 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 PSMD9O00233 223 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 TMCC2O75069 709 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 CDRT1O95170 752 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 MPZL1O95297 269 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 ABHD16AO95870 558 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 ACTL6AO96019 429 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 SERPINA3P01011 423 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 QDPRP09417 244 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 OR8G3PP0DMU2 310 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 PSKH1P11801 424 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF708P17019 499 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 EDNRAP25101 427 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 PSMB10P40306 273 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 GDI2P50395 445 aaKnown RBP7.91□□□□□ -1.14
CCDC47-207ENST00000612558 RORCP51449 518 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 CLDN18P56856 261 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 DYNC1I2Q13409 638 aaKnown RBP7.91□□□□□ -1.14
CCDC47-207ENST00000612558 EIF2B1Q14232 305 aaKnown RBP7.91□□□□□ -1.14
CCDC47-207ENST00000612558 MEP1BQ16820 701 aa7.91□□□□□ -1.14
CCDC47-207ENST00000612558 LIPNQ5VXI9 398 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms