RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 COPS3Q9UNS2 423 aa15.48■□□□□ 0.07
SREK1-216ENST00000612404 SMG1Q96Q15 3661 aaKnown RBP15.47■□□□□ 0.07
SREK1-216ENST00000612404 INMTO95050 263 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 HRGP04196 525 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 SCG5P05408 212 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 PSMB9P28065 219 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ZNF85Q03923 595 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 FOXF2Q12947 444 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 GALEQ14376 348 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 CEACAM16Q2WEN9 425 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 SSX6Q7RTT6 188 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 CDC20BQ86Y33 519 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 KLHL36Q8N4N3 616 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 THEM6Q8WUY1 208 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 OR5M11Q96RB7 305 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 KCNG2Q9UJ96 466 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ZNF835Q9Y2P0 537 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 POLR1DQ9Y2S0 133 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 CACNA1CQ13936 2221 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 COL6A6A6NMZ7 2263 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ZNF587BE7ETH6 402 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ZNF670-ZNF695F2Z2N8 137 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 SEC14L2O76054 403 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 IL2RAP01589 272 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 HSMCR30P0CW71 290 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 PSKH1P11801 424 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 CD79BP40259 229 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 GUSBP1Q15486 140 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 OTOSQ8NHW6 89 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 FCGR1BQ92637 280 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ZNF649Q9BS31 505 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 POLE4Q9NR33 117 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 PRSS50Q9UI38 385 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 KLHDC2Q9Y2U9 406 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 ARHGAP21Q5T5U3 1957 aa15.47■□□□□ 0.07
SREK1-216ENST00000612404 TMEM129A0AVI4 362 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 ZNF99A8MXY4 864 aaPredicted RBP15.46■□□□□ 0.07
SREK1-216ENST00000612404 KIR2DL2P43627 348 aaPredicted RBP15.46■□□□□ 0.07
SREK1-216ENST00000612404 FAPQ12884 760 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 C9orf135Q5VTT2 229 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 TMPRSS11AQ6ZMR5 421 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 SATL1Q86VE3 508 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 LINC00346Q8IVM7 164 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 SNX33Q8WV41 574 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 GATAD2BQ8WXI9 593 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 MUL1Q969V5 352 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 TMIGD2Q96BF3 282 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 TMEM14AQ9Y6G1 99 aa15.46■□□□□ 0.07
SREK1-216ENST00000612404 TMCC2O75069 709 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 TOXO94900 526 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 TMIGD3P0DMS9 266 aaPredicted RBP15.46■□□□□ 0.06
SREK1-216ENST00000612404 JUNBP17275 347 aaPredicted RBP15.46■□□□□ 0.06
SREK1-216ENST00000612404 MSR1P21757 451 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 OR3A2P47893 321 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 WNT4P56705 351 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 EIF2B1Q14232 305 aaKnown RBP15.46■□□□□ 0.06
SREK1-216ENST00000612404 SPHARQ15513 63 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 UBE2UQ5VVX9 321 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 VWA1Q6PCB0 445 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 MNTQ99583 582 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 TTYH2Q9BSA4 534 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 NELFAQ9H3P2 528 aa15.46■□□□□ 0.06
SREK1-216ENST00000612404 ISG20L2Q9H9L3 353 aaKnown RBP15.46■□□□□ 0.06
SREK1-216ENST00000612404 CAB39Q9Y376 341 aaPredicted RBP15.46■□□□□ 0.06
SREK1-216ENST00000612404 NBASA2RRP1 2371 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 PSMD9O00233 223 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 MAGEB4O15481 346 aaPredicted RBP15.45■□□□□ 0.06
SREK1-216ENST00000612404 ALDH3B2P48448 385 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 RAB39AQ14964 217 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 SLC18B1Q6NT16 456 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 CORO6Q6QEF8 472 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 ZNF322Q6U7Q0 402 aaPredicted RBP15.45■□□□□ 0.06
SREK1-216ENST00000612404 ZNF367Q7RTV3 350 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 LRRC18Q8N456 261 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 OR6K3Q8NGY3 331 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 FOXB1Q99853 325 aa15.45■□□□□ 0.06
SREK1-216ENST00000612404 LSM2Q9Y333 95 aaKnown RBP15.45■□□□□ 0.06
SREK1-216ENST00000612404 INTS1Q8N201 2190 aaKnown RBP15.44■□□□□ 0.06
SREK1-216ENST00000612404 SHANK1Q9Y566 2161 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 J3QLW9 94 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 B4GALT1P15291 398 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ZNF19P17023 458 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ALOX5APP20292 161 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 TIMP3P35625 211 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ACTA2P62736 377 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ACTG2P63267 376 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 TIGD6Q17RP2 521 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 FBXW9Q5XUX1 488 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 FOXL2NBQ6ZUU3 175 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 GPR141Q7Z602 305 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ST6GALNAC3Q8NDV1 305 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 SPRYD4Q8WW59 207 aaPredicted RBP15.44■□□□□ 0.06
SREK1-216ENST00000612404 NABP1Q96AH0 204 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 MRPL48Q96GC5 212 aaKnown RBP15.44■□□□□ 0.06
SREK1-216ENST00000612404 C4orf36Q96KX1 117 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 TMEM38BQ9NVV0 291 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 ZFYVE26Q68DK2 2539 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 GLI4P10075 376 aa15.44■□□□□ 0.06
SREK1-216ENST00000612404 NPR2P20594 1047 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms