RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 COQ7Q99807 217 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 NAA11Q9BSU3 229 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 JKAMPQ9P055 326 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 FOXD3Q9UJU5 478 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-217ENST00000611848 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 ALPK2Q86TB3 2170 aa7.84□□□□□ -1.15
SMAD4-217ENST00000611848 IGHV3-15A0A0B4J1V0 119 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 IQCMA0A1B0GVH7 501 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 TRDV1A0A1B0GX56 115 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 HTR3EA5X5Y0 456 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CCDC182A6NF36 153 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 LIPT2A6NK58 231 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 FAM183AA6NL82 134 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 LOC110117498-PIK3R3F6TDL0 507 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CTDSP2O14595 271 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 MSTNO14793 375 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 SMAD9O15198 467 aaKnown RBP7.83□□□□□ -1.16
SMAD4-217ENST00000611848 SS18L1O75177 396 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-217ENST00000611848 AHSA1O95433 338 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 LALBAP00709 142 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 YES1P07947 543 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 SAGP10523 405 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CD8BP10966 210 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 GALP22466 123 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CD79BP40259 229 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 RPS25P62851 125 aaKnown RBP7.83□□□□□ -1.16
SMAD4-217ENST00000611848 H3F3AP84243 136 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 EGR4Q05215 589 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 RASGEF1BQ0VAM2 473 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 GPR50Q13585 617 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 FBXL19-AS1Q494R0 122 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 VWA1Q6PCB0 445 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 OAFQ86UD1 273 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 ACBD7Q8N6N7 88 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 ARIH2OSQ8N7S6 290 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 OR6K3Q8NGY3 331 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 MFSD8Q8NHS3 518 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 ABHD3Q8WU67 409 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 TNFRSF13CQ96RJ3 184 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM43Q9BTV4 400 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 SP140LQ9H930 580 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 BCO1Q9HAY6 547 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 MCCC2Q9HCC0 563 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 SMURF1Q9HCE7 757 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 INPP5EQ9NRR6 644 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 ASB6Q9NWX5 421 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 RHBDL2Q9NX52 303 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 HAO2Q9NYQ3 351 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 KLHL13Q9P2N7 655 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 PROCRQ9UNN8 238 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CAB39Q9Y376 341 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-217ENST00000611848 CACNA1DQ01668 2161 aa7.83□□□□□ -1.16
SMAD4-217ENST00000611848 TRAV36DV7A0A075B6V5 113 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC22A31A6NKX4 558 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF724A8MTY0 619 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 A8MXE2 369 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 EEF1E1-BLOC1S5C9J1V9 151 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 PRR23D1E9PI22 279 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 EEF1E1O43324 174 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 AKAP8O43823 692 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 FZD7O75084 574 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 CDRT1O95170 752 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 IGF2P01344 180 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 PRR23D2P0DMB1 279 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC2A5P22732 501 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 GTF2E2P29084 291 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 AGTR1P30556 359 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC6A6P31641 620 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 TNFSF8P32971 234 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC9A3P48764 834 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SIRPAP78324 504 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 FABP5Q01469 135 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 MFSD13AQ14CX5 517 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 OR7A5Q15622 319 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC35F1Q5T1Q4 408 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 FAM69AQ5T7M9 428 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SP5Q6BEB4 398 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 ABLIM2Q6H8Q1 611 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 C22orf42Q6IC83 251 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF322Q6U7Q0 402 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 TUSC5Q8IXB3 177 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC37A3Q8NCC5 494 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 OR6S1Q8NH40 331 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 OR51A7Q8NH64 312 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 RNASE6Q93091 150 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM203Q969S6 136 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 KTI12Q96EK9 354 aaPredicted RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 DNAJA3Q96EY1 480 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 KCTD7Q96MP8 289 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 TEAD3Q99594 435 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 KCNS3Q9BQ31 491 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC30A2Q9BRI3 323 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 IFT27Q9BW83 186 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 HCAR1Q9BXC0 346 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SLC19A3Q9BZV2 496 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 MED20Q9H944 212 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 PLSCR4Q9NRQ2 329 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 SNTG1Q9NSN8 517 aa7.82□□□□□ -1.16
SMAD4-217ENST00000611848 CLEC4AQ9UMR7 237 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms