RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TIGD3Q6B0B8 471 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 SCARA5Q6ZMJ2 495 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 Q6ZN92 141 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 PLCZ1Q86YW0 608 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 APOBEC3FQ8IUX4 373 aaKnown RBP3.83□□□□□ -1.8
LINC00397-202ENST00000606785 PIANPQ8IYJ0 282 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 FBXL16Q8N461 479 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 CCDC71LQ8N9Z2 235 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 OR52N1Q8NH53 320 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 PYDC1Q8WXC3 89 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 ING5Q8WYH8 240 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 MYDGFQ969H8 173 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 NEIL2Q969S2 332 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 KIAA1143Q96AT1 154 aaPredicted RBP3.83□□□□□ -1.8
LINC00397-202ENST00000606785 HSFY1Q96LI6 401 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 OR8B4Q96RC9 309 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 SORT1Q99523 831 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF184Q99676 751 aaPredicted RBP3.83□□□□□ -1.8
LINC00397-202ENST00000606785 ATP5SQ99766 215 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 CNPY3Q9BT09 278 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 TMEM59Q9BXS4 323 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 SLC22A4Q9H015 551 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 PARVAQ9NVD7 372 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 FAIMQ9NVQ4 179 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 TREM2Q9NZC2 230 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 B4GALT7Q9UBV7 327 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 PCDH11XQ9BZA7 1347 aa3.83□□□□□ -1.8
LINC00397-202ENST00000606785 CCDC144AA2RUR9 1427 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 KIF15Q9NS87 1388 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 UBN2Q6ZU65 1347 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 IGHV3OR16-13A0A075B7E8 117 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 A0A0J9YYE9 177 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CCL21O00585 134 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 RAB29O14966 203 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 EIF3HO15372 352 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CHMP2AO43633 222 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 TSPAN13O95857 204 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 IGHV2-5P01817 119 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 TRBC1P01850 177 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CALB1P05937 261 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ANXA5P08758 320 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 GNAO1P09471 354 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 RORAP35398 523 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ATP5C1P36542 298 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 NSG1P42857 185 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CRATP43155 626 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 KLK7P49862 253 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 RPL10AP62906 217 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 GPR176Q14439 515 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PIGHQ14442 188 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CYTH1Q15438 398 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 USF2Q15853 346 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 UAP1Q16222 522 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PRR30Q53SZ7 412 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CDKL4Q5MAI5 379 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 LY6G6FQ5SQ64 297 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 TRIM40Q6P9F5 258 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PAMR1Q6UXH9 720 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ASCL5Q7RTU5 278 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 SLC16A14Q7RTX9 510 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF589Q86UQ0 364 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PQLC3Q8N755 202 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 OR4A4PQ8NGN8 299 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 RHOXF1Q8NHV9 184 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 LHFPL5Q8TAF8 219 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF564Q8TBZ8 553 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 DTD1Q8TEA8 209 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 RASSF5Q8WWW0 418 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 HAUS1Q96CS2 278 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CCDC126Q96EE4 140 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ITCHQ96J02 903 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF514Q96K75 400 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ATOH8Q96SQ7 321 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 POTEKPQ9BYX7 375 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 OR51B6Q9H340 312 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ASB8Q9H765 288 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF275Q9NSD4 429 aaPredicted RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 MRPL22Q9NWU5 206 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 LYARQ9NX58 379 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 CMTM6Q9NX76 183 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 STMN3Q9NZ72 180 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PTTG3PQ9NZH4 202 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PEF1Q9UBV8 284 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 KIF25Q9UIL4 384 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF229Q9UJW7 825 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 MMP17Q9ULZ9 603 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 UGT2A1Q9Y4X1 527 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 V9GYQ6 96 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 LRRK1Q38SD2 2015 aa3.82□□□□□ -1.8
LINC00397-202ENST00000606785 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
LINC00397-202ENST00000606785 WDR7Q9Y4E6 1490 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 IGLV3-22A0A075B6J6 115 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 A0A1W2PQ72 361 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 A6NIZ1 184 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF98A6NK75 572 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 SERF1AO75920 110 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms