RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 ICA1LQ8NDH6 482 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 CPEB3Q8NE35 698 aaKnown RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 OR9Q2Q8NGE9 314 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 OR1J2Q8NGS2 313 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 ASB9Q96DX5 294 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 SAMD8Q96LT4 415 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 ERMAPQ96PL5 475 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 IFT27Q9BW83 186 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 REG4Q9BYZ8 158 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 MRPL37Q9BZE1 423 aaKnown RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 SYT4Q9H2B2 425 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 LRMDAQ9H2I8 198 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 OR52D1Q9H346 318 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 EMC7Q9NPA0 242 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 SLC7A8Q9UHI5 535 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 LYVE1Q9Y5Y7 322 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 ZFHX3Q15911 3703 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 IGHV4-30-2A0A087WSY4 118 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 TMEM129A0AVI4 362 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 FAM171A2A8MVW0 826 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 MGRN1O60291 552 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 SLC16A7O60669 478 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 F12P00748 615 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-208ENST00000604743 SCG5P05408 212 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 CTLA4P16410 223 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 FPR3P25089 353 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 SLC6A6P31641 620 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 GLRXP35754 106 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 CENPAP49450 140 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 PSG4Q00888 419 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 MSMPQ1L6U9 139 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 RFX4Q33E94 735 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 C1orf94Q6P1W5 598 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 PGBD2Q6P3X8 592 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 PTCHD4Q6ZW05 846 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 LRP11Q86VZ4 500 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 MRPL24Q96A35 216 aaKnown RBP12.42□□□□□ -0.42
TUBE1-208ENST00000604743 GPX7Q96SL4 187 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-208ENST00000604743 DOK1Q99704 481 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF416Q9BWM5 594 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 C1orf198Q9H425 327 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 MAGIXQ9H6Y5 334 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 POLE4Q9NR33 117 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 FKBP7Q9Y680 259 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 U3KQV3 271 aa12.42□□□□□ -0.42
TUBE1-208ENST00000604743 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ACOT8O14734 319 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 KHDRBS3O75525 346 aaKnown RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 CCNB2O95067 398 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 LCKP06239 509 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ADRA2AP08913 450 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 CST2P09228 141 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 MSR1P21757 451 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 STOMP27105 288 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 NOS3P29474 1203 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 CDKN2AP42771 156 aaKnown RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 MAGEA2P43356 314 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 GSSP48637 474 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 PPOXP50336 477 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ERVS71-1P61550 626 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 TSPAN31Q12999 210 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 DNAL1Q4LDG9 190 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 RGS7BPQ6MZT1 257 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 UGT2A3Q6UWM9 527 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 DNM1P46Q6ZS02 220 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 FOXL2NBQ6ZUU3 175 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 FAM168AQ92567 244 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 BTBD10Q9BSF8 475 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 TRIM15Q9C019 465 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 NUAK2Q9H093 628 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 RAB1BQ9H0U4 201 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 TPK1Q9H3S4 243 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 EGLN3Q9H6Z9 239 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 REEP1Q9H902 201 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 COA3Q9Y2R0 106 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 SAMHD1Q9Y3Z3 626 aaKnown RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 TIMM10BQ9Y5J6 103 aa12.41□□□□□ -0.42
TUBE1-208ENST00000604743 YLPM1P49750 1951 aaKnown RBP12.41□□□□□ -0.42
TUBE1-208ENST00000604743 ABCA1O95477 2261 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 C5orf49A4QMS7 147 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 C12orf71A8MTZ7 269 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 AHCYL1O43865 530 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 MPZL1O95297 269 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 TXNDC12O95881 172 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 GASTP01350 101 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms