RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 GABARAPO95166 117 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 HLA-DPB1P04440 258 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 YES1P07947 543 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 NPR2P20594 1047 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 GALP22466 123 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 GABRA5P31644 462 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 TUBA1BP68363 451 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 CNPY1Q3B7I2 92 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 C4orf17Q53FE4 359 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 OR2G6Q5TZ20 316 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 TUBA1AQ71U36 451 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 KLBQ86Z14 1044 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.33□□□□□ -0.6
ZNF548-210ENST00000600442 C20orf196Q8IYI0 205 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 OTOSQ8NHW6 89 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 MCHR2Q969V1 340 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 NMD3Q96D46 503 aaKnown RBP11.33□□□□□ -0.6
ZNF548-210ENST00000600442 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 DOK1Q99704 481 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 NDUFB11Q9NX14 153 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 GNG8Q9UK08 70 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 IKZF2Q9UKS7 526 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 STUB1Q9UNE7 303 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 CSAG2Q9Y5P2 127 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 FLVCR1Q9Y5Y0 555 aa11.33□□□□□ -0.6
ZNF548-210ENST00000600442 TVP23AA6NH52 213 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 AHRRA9YTQ3 701 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 H0YC42 278 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 PTGER4P35408 488 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 LIPAP38571 399 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 PMP22Q01453 160 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 HIST3H3Q16695 136 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 LIPKQ5VXJ0 399 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 OR2A2Q6IF42 318 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 RPL22L1Q6P5R6 122 aaKnown RBP11.32□□□□□ -0.6
ZNF548-210ENST00000600442 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 PAMR1Q6UXH9 720 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 NHLRC1Q6VVB1 395 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-210ENST00000600442 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 KRT77Q7Z794 578 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 PHC2Q8IXK0 858 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 MS4A15Q8N5U1 240 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 YIPF7Q8N8F6 280 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 SLC26A10Q8NG04 563 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 THRSPQ92748 146 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 C12orf43Q96C57 262 aaKnown RBP11.32□□□□□ -0.6
ZNF548-210ENST00000600442 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 OPALINQ96PE5 141 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 RBM24Q9BX46 236 aaKnown RBP11.32□□□□□ -0.6
ZNF548-210ENST00000600442 PRDM14Q9GZV8 571 aa11.32□□□□□ -0.6
ZNF548-210ENST00000600442 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
ZNF548-210ENST00000600442 ARPC4-TTLL3A0A0A6YYG9 625 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 LOC100506127A0A0U1RQW1 187 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF716A6NP11 495 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 H3BMQ9 156 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 DCTN6O00399 190 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 DHHO43323 396 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 GPRIN2O60269 458 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 RAMP1O60894 148 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 FARS2O95363 451 aaKnown RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 GABRA1P14867 456 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 CELP19835 753 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ALOX5APP20292 161 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 MSR1P21757 451 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 PTGS2P35354 604 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 SOX6P35712 828 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 TGM4P49221 684 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 RIDAP52758 137 aaKnown RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 LSM6P62312 80 aaKnown RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 SIRPAP78324 504 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF85Q03923 595 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 EIF2B1Q14232 305 aaKnown RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 TAF13Q15543 124 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 STK11Q15831 433 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 FOXB2Q5VYV0 432 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF100Q8IYN0 542 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 TMEM123Q8N131 208 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 CPT1CQ8TCG5 803 aa11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF845Q96IR2 970 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 ZNF385AQ96PM9 386 aaKnown RBP11.31□□□□□ -0.6
ZNF548-210ENST00000600442 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms