RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 S100PBPQ96BU1 408 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 FOXN4Q96NZ1 517 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 TEAD3Q99594 435 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 ANKRD60Q9BZ19 345 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 ACTR6Q9GZN1 396 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 SEC61A2Q9H9S3 476 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 OBP2BQ9NPH6 170 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC17A5Q9NRA2 495 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 RASSF1Q9NS23 344 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 DNAJC27Q9NZQ0 273 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 AASSQ9UDR5 926 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
CHMP2A-206ENST00000600118 LRRK2Q5S007 2527 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 C19orf84I3L1E1 186 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 ENTPD6O75354 484 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 PPP3CBP16298 524 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 MSR1P21757 451 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 MYF6P23409 242 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 GSTT1P30711 240 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 HTR1FP30939 366 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 FMO3P31513 532 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 GUCA1AP43080 201 aaPredicted RBP11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 IL5RAQ01344 420 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 TEKQ02763 1124 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 TMED1Q13445 227 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 SGCAQ16586 387 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 MEP1BQ16820 701 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 PCK2Q16822 640 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 KLHL12Q53G59 568 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 THAP5Q7Z6K1 395 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 TIGD4Q8IY51 512 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 CCDC36Q8IYA8 594 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 C8orf59Q8N0T1 100 aaPredicted RBP11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 OR6K6Q8NGW6 343 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF416Q9BWM5 594 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 EMC7Q9NPA0 242 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 B3GNT2Q9NY97 397 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 HAO2Q9NYQ3 351 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF503-AS2A6NEH8 195 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 TVP23AA6NH52 213 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC22A31A6NKX4 558 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 FARS2O95363 451 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 THBDP07204 575 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 CST2P09228 141 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 MMP7P09237 267 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 PSKH1P11801 424 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 CDH11P55287 796 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 GGTLC2Q14390 218 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 TAB1Q15750 504 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 TEX30Q5JUR7 227 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 OTPQ5XKR4 325 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 B3GLCTQ6Y288 498 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 DPPA2Q7Z7J5 298 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 HSD17B8Q92506 261 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 RFKQ969G6 155 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 ZMYND19Q96E35 227 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 FBXO17Q96EF6 278 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 Q96MT0 163 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 WFIKKN1Q96NZ8 548 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 SH3GL3Q99963 347 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 WACQ9BTA9 647 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 WDR76Q9H967 626 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 H2AFY2Q9P0M6 372 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 WARS2Q9UGM6 360 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 AMDHD2Q9Y303 409 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 TENM4Q6N022 2769 aa11.05□□□□□ -0.64
CHMP2A-206ENST00000600118 SH3D21A4FU49 640 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 DENRO43583 198 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 CLDN1O95832 211 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 HLA-HP01893 362 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 PEX19P40855 299 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 ENTPD1P49961 510 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 RPS7P62081 194 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 HIST1H3AP68431 136 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 HIST2H3PS2Q5TEC6 136 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 LCN1P1Q5VSP4 162 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 SSX8Q7RTT4 187 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC16A14Q7RTX9 510 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 SYT9Q86SS6 491 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 DMRTC2Q8IXT2 367 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 LRRC18Q8N456 261 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 CNIH3Q8TBE1 160 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF75AQ96N20 296 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 INTS14Q96SY0 518 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms