RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ZNF32P17041 273 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 FUT1P19526 365 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 GDI2P50395 445 aaKnown RBP17.94■□□□□ 0.46
PNKP-212ENST00000599454 FOXL1Q12952 345 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 SELPLGQ14242 412 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 THEM4Q5T1C6 240 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 ZNF101Q8IZC7 436 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 KLF14Q8TD94 323 aaPredicted RBP17.94■□□□□ 0.46
PNKP-212ENST00000599454 STON2Q8WXE9 905 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 POP5Q969H6 163 aaKnown RBP17.94■□□□□ 0.46
PNKP-212ENST00000599454 NABP1Q96AH0 204 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 POLR2J2Q9GZM3 115 aaKnown RBP17.94■□□□□ 0.46
PNKP-212ENST00000599454 POLR2J3Q9H1A7 115 aaKnown RBP17.94■□□□□ 0.46
PNKP-212ENST00000599454 NANOGQ9H9S0 305 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 ZDHHC8Q9ULC8 765 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 UGT2A1Q9Y4X1 527 aa17.94■□□□□ 0.46
PNKP-212ENST00000599454 ISPDA4D126 451 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 C5orf49A4QMS7 147 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 ICMTO60725 284 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 SLC2A10O95528 541 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 CD55P08174 381 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 TSPAN19P0C672 248 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 MPV17P39210 176 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 WNT5AP41221 380 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 PRR31Q5SQ13 230 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 ARMC4Q5T2S8 1044 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 RBMS3Q6XE24 437 aaKnown RBP17.93■□□□□ 0.46
PNKP-212ENST00000599454 ALDH16A1Q8IZ83 802 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 SLC25A40Q8TBP6 338 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 TSPEARQ8WU66 669 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 LIPHQ8WWY8 451 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 NMD3Q96D46 503 aaKnown RBP17.93■□□□□ 0.46
PNKP-212ENST00000599454 SGTBQ96EQ0 304 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 ZNF747Q9BV97 191 aa17.93■□□□□ 0.46
PNKP-212ENST00000599454 ZMAT3Q9HA38 289 aaKnown RBP17.93■□□□□ 0.46
PNKP-212ENST00000599454 LOC100509620A0A075B734 347 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 ZSCAN5BA6NJL1 495 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 HKR1P10072 659 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 CDAP32320 146 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 AQP2P41181 271 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 LCN2P80188 198 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 TAF11Q15544 211 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 SPATA46Q5T0L3 261 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 FAM27BQ5VT28 67 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 SHISA2Q6UWI4 295 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 CCDC80Q76M96 950 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 FNDC8Q8TC99 324 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 DVL3Q92997 716 aaPredicted RBP17.92■□□□□ 0.46
PNKP-212ENST00000599454 OR2J1Q9GZK6 312 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 UBAP1Q9NZ09 502 aa17.92■□□□□ 0.46
PNKP-212ENST00000599454 TAS2R41P59536 307 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 PPP1CBP62140 327 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 PSG4Q00888 419 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 CD47Q08722 323 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 NFYCQ13952 458 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 SGCAQ16586 387 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 VMACQ2NL98 169 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 TUSC1Q2TAM9 212 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 TMEM255AQ5JRV8 349 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 AGBL2Q5U5Z8 902 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 SLC25A47Q6Q0C1 308 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 ZER1Q7Z7L7 766 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 OR10A6Q8NH74 314 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 AKR7LQ8NHP1 331 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 PFN4Q8NHR9 129 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 HDAC2Q92769 488 aaKnown RBP17.91■□□□□ 0.46
PNKP-212ENST00000599454 GPA33Q99795 319 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 ALG12Q9BV10 488 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 TXNIPQ9H3M7 391 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 ZNF696Q9H7X3 374 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 ELOVL3Q9HB03 270 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 KLHL21Q9UJP4 597 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 NPTNQ9Y639 398 aa17.91■□□□□ 0.46
PNKP-212ENST00000599454 PKD1L1Q8TDX9 2849 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 OR5F1O95221 314 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 CST2P09228 141 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 ARHGDIAP52565 204 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 PCBD1P61457 104 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 ARL9Q6T311 187 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 RFPL4BQ6ZWI9 263 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 DOK3Q7L591 496 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 NKAIN4Q8IVV8 208 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 SPICQ8N5J4 248 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 ABHD4Q8TB40 342 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 TMEM255BQ8WV15 326 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 TMEM239Q8WW34 195 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 NSMAFQ92636 917 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 OR2H1Q9GZK4 316 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 C20orf141Q9NUB4 165 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 BAG5Q9UL15 447 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 POLR3KQ9Y2Y1 108 aaPredicted RBP17.9■□□□□ 0.46
PNKP-212ENST00000599454 SH3GLB1Q9Y371 365 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 MED31Q9Y3C7 131 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 PPIAL4AQ9Y536 164 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 PCDHGB1Q9Y5G3 927 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 TIMM10BQ9Y5J6 103 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 MEGF8Q7Z7M0 2845 aa17.9■□□□□ 0.46
PNKP-212ENST00000599454 HTR3EA5X5Y0 456 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 TMPRSS2O15393 492 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 THRBP10828 461 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms