RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 IFNW1P05000 195 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 TSPAN19P0C672 248 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 RAP2AP10114 183 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 THRBP10828 461 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 DAOP14920 347 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 ALDH3B1P43353 468 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 DAP3P51398 398 aaKnown RBP11.84□□□□□ -0.51
SCAF1-203ENST00000598359 ST3GAL3Q11203 375 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 ARMC4Q5T2S8 1044 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 TBPL2Q6SJ96 375 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 NRMQ8IXM6 262 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 LIPHQ8WWY8 451 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 LZICQ8WZA0 190 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 NSMAFQ92636 917 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 MRPL24Q96A35 216 aaKnown RBP11.84□□□□□ -0.51
SCAF1-203ENST00000598359 HSH2DQ96JZ2 352 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 RNF121Q9H920 327 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 VSTM5A8MXK1 200 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 FARS2O95363 451 aaKnown RBP11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SERPINA5P05154 406 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF84P51523 738 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 GALK2Q01415 458 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 CD47Q08722 323 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 IQCCQ4KMZ1 466 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 FAM98BQ52LJ0 330 aaKnown RBP11.83□□□□□ -0.52
SCAF1-203ENST00000598359 IFI44LQ53G44 452 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 ALG10Q5BKT4 473 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 CYB5R2Q6BCY4 276 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 CBLL1Q75N03 491 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 TSEN54Q7Z6J9 526 aaKnown RBP11.83□□□□□ -0.52
SCAF1-203ENST00000598359 HIPK1Q86Z02 1210 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 OFCC1Q8IZS5 231 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 ARIH2OSQ8N7S6 290 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 OR13C2Q8NGS9 318 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 OR51A7Q8NH64 312 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 KCNK17Q96T54 332 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 C9orf16Q9BUW7 83 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 FNDC11Q9BVV2 318 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 DCAF13Q9NV06 445 aaKnown RBP11.83□□□□□ -0.52
SCAF1-203ENST00000598359 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SPEF1Q9Y4P9 236 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 UGT2A1Q9Y4X1 527 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 SVEP1Q4LDE5 3571 aa11.83□□□□□ -0.52
SCAF1-203ENST00000598359 A0A087WUU8 490 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 NDUFS8O00217 210 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 IGF2P01344 180 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 LYNP07948 512 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 SAGP10523 405 aaPredicted RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 APEHP13798 732 aaKnown RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 APEX1P27695 318 aaKnown RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 GLRXP35754 106 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 GPR4P46093 362 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 CTXN1P60606 82 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 FHL1Q13642 323 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 TRAM2Q15035 370 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 SGCAQ16586 387 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 C10orf128Q5T292 105 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 TMEM53Q6P2H8 277 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 UGT2A3Q6UWM9 527 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 GEMIN6Q8WXD5 167 aaKnown RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 FAM162AQ96A26 154 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 NABP1Q96AH0 204 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 NMD3Q96D46 503 aaKnown RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 TSPAN32Q96QS1 320 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 SLC29A1Q99808 456 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 CIB1Q99828 191 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 CHID1Q9BWS9 393 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 TXNIPQ9H3M7 391 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF346Q9UL40 294 aaKnown RBP11.82□□□□□ -0.52
SCAF1-203ENST00000598359 HIF3AQ9Y2N7 669 aa11.82□□□□□ -0.52
SCAF1-203ENST00000598359 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 A6NHS1 94 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 EFCAB9A8MZ26 197 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 H7C1C5 153 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 M0R233 179 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 CDC42EP2O14613 210 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 SYNGR3O43761 229 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 CLPTM1O96005 669 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 IL2RGP31785 369 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 IFNA8P32881 189 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 MAGEA2P43356 314 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms